RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 LCE4AQ5TA78 99 aa5.99□□□□□ -1.45
RPA1-203ENST00000571058 MIR22HGQ0VDD5 57 aa5.97□□□□□ -1.45
RPA1-203ENST00000571058 KRTAP12-3P60328 96 aa5.96□□□□□ -1.46
RPA1-203ENST00000571058 K7ERS5 55 aa5.94□□□□□ -1.46
RPA1-203ENST00000571058 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
RPA1-203ENST00000571058 V9GYY9 64 aa5.94□□□□□ -1.46
RPA1-203ENST00000571058 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
RPA1-203ENST00000571058 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.46
RPA1-203ENST00000571058 KRTAP5-4Q6L8H1 288 aa5.86□□□□□ -1.47
RPA1-203ENST00000571058 GPR98Q8WXG9 6306 aa5.86□□□□□ -1.47
RPA1-203ENST00000571058 MT4P47944 62 aa5.85□□□□□ -1.47
RPA1-203ENST00000571058 Q1T7F1 81 aa5.84□□□□□ -1.47
RPA1-203ENST00000571058 HMCN1Q96RW7 5635 aa5.83□□□□□ -1.48
RPA1-203ENST00000571058 PSPHP1O15172 72 aa5.81□□□□□ -1.48
RPA1-203ENST00000571058 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
RPA1-203ENST00000571058 KRTAP19-4Q3LI73 84 aa5.75□□□□□ -1.49
RPA1-203ENST00000571058 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
RPA1-203ENST00000571058 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
RPA1-203ENST00000571058 A6NED7 52 aa5.66□□□□□ -1.5
RPA1-203ENST00000571058 KRTAP5-5Q701N2 237 aaPredicted RBP5.62□□□□□ -1.51
RPA1-203ENST00000571058 AHNAK2Q8IVF2 5795 aa5.6□□□□□ -1.51
RPA1-203ENST00000571058 CDC42SE1Q9NRR8 79 aa5.59□□□□□ -1.51
RPA1-203ENST00000571058 KRTAP15-1Q3LI76 137 aa5.58□□□□□ -1.52
RPA1-203ENST00000571058 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
RPA1-203ENST00000571058 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
RPA1-203ENST00000571058 RPS28P62857 69 aaKnown RBP5.53□□□□□ -1.52
RPA1-203ENST00000571058 KRTAP5-10Q6L8G5 202 aa5.53□□□□□ -1.52
RPA1-203ENST00000571058 KRTAP20-2Q3LI61 65 aa5.51□□□□□ -1.53
RPA1-203ENST00000571058 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
RPA1-203ENST00000571058 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
RPA1-203ENST00000571058 ROMO1P60602 79 aa5.47□□□□□ -1.53
RPA1-203ENST00000571058 KRTAP5-3Q6L8H2 238 aa5.4□□□□□ -1.54
RPA1-203ENST00000571058 KRTAP5-7Q6L8G8 165 aa5.34□□□□□ -1.55
RPA1-203ENST00000571058 PCP4P48539 62 aa5.33□□□□□ -1.56
RPA1-203ENST00000571058 SYNE1Q8NF91 8797 aaKnown RBP5.3□□□□□ -1.56
RPA1-203ENST00000571058 MT1AP04731 61 aa5.24□□□□□ -1.57
RPA1-203ENST00000571058 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
RPA1-203ENST00000571058 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
RPA1-203ENST00000571058 KRTAP9-6A8MVA2 160 aa5.11□□□□□ -1.59
RPA1-203ENST00000571058 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
RPA1-203ENST00000571058 KRTAP4-11Q9BYQ6 195 aa5.05□□□□□ -1.6
RPA1-203ENST00000571058 KRTAP6-2Q3LI66 62 aa4.95□□□□□ -1.62
RPA1-203ENST00000571058 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
RPA1-203ENST00000571058 MT3P25713 68 aa4.82□□□□□ -1.64
RPA1-203ENST00000571058 BRK1Q8WUW1 75 aa4.8□□□□□ -1.64
RPA1-203ENST00000571058 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
RPA1-203ENST00000571058 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
RPA1-203ENST00000571058 MUC5BQ9HC84 5762 aaPredicted RBP4.62□□□□□ -1.67
RPA1-203ENST00000571058 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
RPA1-203ENST00000571058 AHNAKQ09666 5890 aaKnown RBP4.61□□□□□ -1.67
RPA1-203ENST00000571058 KRTAP5-1Q6L8H4 278 aa4.58□□□□□ -1.68
RPA1-203ENST00000571058 PMAIP1Q13794 54 aa4.53□□□□□ -1.68
RPA1-203ENST00000571058 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
RPA1-203ENST00000571058 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
RPA1-203ENST00000571058 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
RPA1-203ENST00000571058 PRO0628Q9UI54 55 aa4.14□□□□□ -1.75
RPA1-203ENST00000571058 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
RPA1-203ENST00000571058 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
RPA1-203ENST00000571058 H3BS24 57 aa4.04□□□□□ -1.76
RPA1-203ENST00000571058 KTN1-AS1Q86SY8 53 aa3.99□□□□□ -1.77
RPA1-203ENST00000571058 LCE3DQ9BYE3 92 aa3.97□□□□□ -1.77
RPA1-203ENST00000571058 SVIPQ8NHG7 77 aa3.82□□□□□ -1.8
RPA1-203ENST00000571058 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
RPA1-203ENST00000571058 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
RPA1-203ENST00000571058 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
RPA1-203ENST00000571058 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
RPA1-203ENST00000571058 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
RPA1-203ENST00000571058 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
RPA1-203ENST00000571058 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
RPA1-203ENST00000571058 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
RPA1-203ENST00000571058 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
RPA1-203ENST00000571058 A0A0A0MQY5 61 aa3.02□□□□□ -1.93
RPA1-203ENST00000571058 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
RPA1-203ENST00000571058 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
RPA1-203ENST00000571058 PRM1P04553 51 aa2.76□□□□□ -1.97
RPA1-203ENST00000571058 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
RPA1-203ENST00000571058 INE1O15225 51 aa2.36□□□□□ -2.03
RPA1-203ENST00000571058 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms