RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 NDUFAF8A1L188 74 aa6.35□□□□□ -1.39
RPAIN-208ENST00000571043 LUZP6Q538Z0 58 aa6.35□□□□□ -1.39
RPAIN-208ENST00000571043 MUC12Q9UKN1 5478 aa6.34□□□□□ -1.39
RPAIN-208ENST00000571043 KRTAP19-7Q3SYF9 63 aa6.33□□□□□ -1.4
RPAIN-208ENST00000571043 SPRR2FQ96RM1 72 aa6.31□□□□□ -1.4
RPAIN-208ENST00000571043 MDN1Q9NU22 5596 aa6.24□□□□□ -1.41
RPAIN-208ENST00000571043 MT1EP04732 61 aa6.21□□□□□ -1.42
RPAIN-208ENST00000571043 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
RPAIN-208ENST00000571043 LCE3CQ5T5A8 94 aa6.18□□□□□ -1.42
RPAIN-208ENST00000571043 NEBP20929 6669 aa6.17□□□□□ -1.42
RPAIN-208ENST00000571043 MT1LQ93083 61 aa6.12□□□□□ -1.43
RPAIN-208ENST00000571043 LCE1AQ5T7P2 110 aa6.1□□□□□ -1.43
RPAIN-208ENST00000571043 SPRR2EP22531 72 aa6.08□□□□□ -1.44
RPAIN-208ENST00000571043 SPRR2BP35325 72 aa6.08□□□□□ -1.44
RPAIN-208ENST00000571043 SPRR2AP35326 72 aa6.08□□□□□ -1.44
RPAIN-208ENST00000571043 KRTAP4-12Q9BQ66 201 aa6.06□□□□□ -1.44
RPAIN-208ENST00000571043 KRTAP19-3Q7Z4W3 81 aa6.02□□□□□ -1.45
RPAIN-208ENST00000571043 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
RPAIN-208ENST00000571043 MT1GP13640 62 aa5.96□□□□□ -1.46
RPAIN-208ENST00000571043 KRTAP20-1Q3LI63 56 aa5.96□□□□□ -1.46
RPAIN-208ENST00000571043 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
RPAIN-208ENST00000571043 KRTAP4-7Q9BYR0 210 aa5.93□□□□□ -1.46
RPAIN-208ENST00000571043 SPRR2DP22532 72 aa5.86□□□□□ -1.47
RPAIN-208ENST00000571043 MT1MQ8N339 61 aa5.84□□□□□ -1.47
RPAIN-208ENST00000571043 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.48
RPAIN-208ENST00000571043 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
RPAIN-208ENST00000571043 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
RPAIN-208ENST00000571043 DSTQ03001 7570 aaKnown RBP5.79□□□□□ -1.48
RPAIN-208ENST00000571043 KRTAP2-3P0C7H8 128 aa5.74□□□□□ -1.49
RPAIN-208ENST00000571043 KRTAP2-4Q9BYR9 128 aa5.74□□□□□ -1.49
RPAIN-208ENST00000571043 KRTAP4-3Q9BYR4 195 aa5.7□□□□□ -1.5
RPAIN-208ENST00000571043 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
RPAIN-208ENST00000571043 A0A0A0MQY5 61 aa5.67□□□□□ -1.5
RPAIN-208ENST00000571043 KRTAP2-2Q9BYT5 123 aa5.57□□□□□ -1.52
RPAIN-208ENST00000571043 KRTAP2-1Q9BYU5 128 aa5.57□□□□□ -1.52
RPAIN-208ENST00000571043 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
RPAIN-208ENST00000571043 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
RPAIN-208ENST00000571043 KRTAP5-5Q701N2 237 aaPredicted RBP5.33□□□□□ -1.56
RPAIN-208ENST00000571043 GPR98Q8WXG9 6306 aa5.29□□□□□ -1.56
RPAIN-208ENST00000571043 INE1O15225 51 aa5.28□□□□□ -1.56
RPAIN-208ENST00000571043 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
RPAIN-208ENST00000571043 KRTAP5-4Q6L8H1 288 aa5.27□□□□□ -1.57
RPAIN-208ENST00000571043 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
RPAIN-208ENST00000571043 MT1AP04731 61 aa5.21□□□□□ -1.58
RPAIN-208ENST00000571043 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
RPAIN-208ENST00000571043 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
RPAIN-208ENST00000571043 MT4P47944 62 aa5.09□□□□□ -1.59
RPAIN-208ENST00000571043 HMCN1Q96RW7 5635 aa5.06□□□□□ -1.6
RPAIN-208ENST00000571043 KRTAP12-4P60329 112 aa5.03□□□□□ -1.6
RPAIN-208ENST00000571043 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
RPAIN-208ENST00000571043 KRTAP20-2Q3LI61 65 aa4.92□□□□□ -1.62
RPAIN-208ENST00000571043 AHNAK2Q8IVF2 5795 aa4.81□□□□□ -1.64
RPAIN-208ENST00000571043 MT3P25713 68 aa4.72□□□□□ -1.65
RPAIN-208ENST00000571043 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
RPAIN-208ENST00000571043 KRTAP5-10Q6L8G5 202 aa4.71□□□□□ -1.66
RPAIN-208ENST00000571043 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
RPAIN-208ENST00000571043 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
RPAIN-208ENST00000571043 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.67
RPAIN-208ENST00000571043 KRTAP5-7Q6L8G8 165 aa4.56□□□□□ -1.68
RPAIN-208ENST00000571043 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
RPAIN-208ENST00000571043 KRTAP5-8O75690 187 aa4.21□□□□□ -1.74
RPAIN-208ENST00000571043 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
RPAIN-208ENST00000571043 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
RPAIN-208ENST00000571043 PRM1P04553 51 aa4.09□□□□□ -1.75
RPAIN-208ENST00000571043 AHNAKQ09666 5890 aaKnown RBP4.07□□□□□ -1.76
RPAIN-208ENST00000571043 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
RPAIN-208ENST00000571043 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
RPAIN-208ENST00000571043 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
RPAIN-208ENST00000571043 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
RPAIN-208ENST00000571043 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
RPAIN-208ENST00000571043 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
RPAIN-208ENST00000571043 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
RPAIN-208ENST00000571043 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
RPAIN-208ENST00000571043 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
RPAIN-208ENST00000571043 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
RPAIN-208ENST00000571043 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
RPAIN-208ENST00000571043 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
RPAIN-208ENST00000571043 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 111 ms