RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 CDC42SE1Q9NRR8 79 aa3.19□□□□□ -1.9
CNOT1-222ENST00000570139 KRTAP10-10P60014 251 aa3.18□□□□□ -1.9
CNOT1-222ENST00000570139 MIR22HGQ0VDD5 57 aa3.18□□□□□ -1.9
CNOT1-222ENST00000570139 SPATA8Q6RVD6 105 aa3.17□□□□□ -1.9
CNOT1-222ENST00000570139 BRK1Q8WUW1 75 aa3.15□□□□□ -1.91
CNOT1-222ENST00000570139 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
CNOT1-222ENST00000570139 A6NN06 94 aa3.09□□□□□ -1.91
CNOT1-222ENST00000570139 MT2AP02795 61 aa3.09□□□□□ -1.91
CNOT1-222ENST00000570139 KRTAP13-4Q3LI77 160 aa3.08□□□□□ -1.92
CNOT1-222ENST00000570139 SPRR2GQ9BYE4 73 aa3.07□□□□□ -1.92
CNOT1-222ENST00000570139 MT1FP04733 61 aa3.06□□□□□ -1.92
CNOT1-222ENST00000570139 ROMO1P60602 79 aa3.05□□□□□ -1.92
CNOT1-222ENST00000570139 A0A0D9SG42 100 aa3.04□□□□□ -1.92
CNOT1-222ENST00000570139 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
CNOT1-222ENST00000570139 KRTAP12-1P59990 96 aa3.01□□□□□ -1.93
CNOT1-222ENST00000570139 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
CNOT1-222ENST00000570139 PLAC4Q8WY50 150 aa2.98□□□□□ -1.93
CNOT1-222ENST00000570139 PP632Q6XCG6 107 aa2.94□□□□□ -1.94
CNOT1-222ENST00000570139 LCE3AQ5TA76 89 aa2.93□□□□□ -1.94
CNOT1-222ENST00000570139 MT1BP07438 61 aa2.89□□□□□ -1.95
CNOT1-222ENST00000570139 KRTAP6-3Q3LI67 103 aa2.87□□□□□ -1.95
CNOT1-222ENST00000570139 SSPOA2VEC9 5147 aa2.86□□□□□ -1.95
CNOT1-222ENST00000570139 USH2AO75445 5202 aa2.86□□□□□ -1.95
CNOT1-222ENST00000570139 C10orf95Q9H7T3 257 aa2.83□□□□□ -1.96
CNOT1-222ENST00000570139 TNP1P09430 55 aa2.82□□□□□ -1.96
CNOT1-222ENST00000570139 MT1XP80297 61 aa2.8□□□□□ -1.96
CNOT1-222ENST00000570139 SYNE2Q8WXH0 6885 aaKnown RBP2.79□□□□□ -1.96
CNOT1-222ENST00000570139 KRTAP19-6Q3LI70 58 aa2.78□□□□□ -1.96
CNOT1-222ENST00000570139 MACF1Q9UPN3 7388 aaKnown RBP2.78□□□□□ -1.96
CNOT1-222ENST00000570139 FCGBPQ9Y6R7 5405 aaPredicted RBP2.76□□□□□ -1.97
CNOT1-222ENST00000570139 INE1O15225 51 aa2.74□□□□□ -1.97
CNOT1-222ENST00000570139 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
CNOT1-222ENST00000570139 NEBP20929 6669 aa2.7□□□□□ -1.98
CNOT1-222ENST00000570139 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
CNOT1-222ENST00000570139 KRTAP12-3P60328 96 aa2.67□□□□□ -1.98
CNOT1-222ENST00000570139 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
CNOT1-222ENST00000570139 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
CNOT1-222ENST00000570139 KRTAP8-1Q8IUC2 63 aa2.64□□□□□ -1.99
CNOT1-222ENST00000570139 MUC12Q9UKN1 5478 aa2.55□□□□□ -2
CNOT1-222ENST00000570139 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
CNOT1-222ENST00000570139 KRTAP19-5Q3LI72 72 aa2.52□□□□□ -2.01
CNOT1-222ENST00000570139 KMT2DO14686 5537 aa2.51□□□□□ -2.01
CNOT1-222ENST00000570139 KRTAP2-3P0C7H8 128 aa2.51□□□□□ -2.01
CNOT1-222ENST00000570139 KRTAP2-4Q9BYR9 128 aa2.51□□□□□ -2.01
CNOT1-222ENST00000570139 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
CNOT1-222ENST00000570139 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
CNOT1-222ENST00000570139 MT1EP04732 61 aa2.47□□□□□ -2.01
CNOT1-222ENST00000570139 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
CNOT1-222ENST00000570139 SPRR2FQ96RM1 72 aa2.44□□□□□ -2.02
CNOT1-222ENST00000570139 MT1LQ93083 61 aa2.42□□□□□ -2.02
CNOT1-222ENST00000570139 KRTAP19-3Q7Z4W3 81 aa2.4□□□□□ -2.03
CNOT1-222ENST00000570139 KRTAP2-1Q9BYU5 128 aa2.4□□□□□ -2.03
CNOT1-222ENST00000570139 MT1GP13640 62 aa2.39□□□□□ -2.03
CNOT1-222ENST00000570139 MT1MQ8N339 61 aa2.33□□□□□ -2.04
CNOT1-222ENST00000570139 SPRR2EP22531 72 aa2.32□□□□□ -2.04
CNOT1-222ENST00000570139 SPRR2BP35325 72 aa2.32□□□□□ -2.04
CNOT1-222ENST00000570139 SPRR2AP35326 72 aa2.32□□□□□ -2.04
CNOT1-222ENST00000570139 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
CNOT1-222ENST00000570139 SPRR2DP22532 72 aa2.25□□□□□ -2.05
CNOT1-222ENST00000570139 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
CNOT1-222ENST00000570139 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
CNOT1-222ENST00000570139 KRTAP5-10Q6L8G5 202 aa2.15□□□□□ -2.07
CNOT1-222ENST00000570139 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
CNOT1-222ENST00000570139 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
CNOT1-222ENST00000570139 MT1AP04731 61 aa2.08□□□□□ -2.08
CNOT1-222ENST00000570139 KRTAP6-1Q3LI64 71 aa2.01□□□□□ -2.09
CNOT1-222ENST00000570139 MT4P47944 62 aa1.96□□□□□ -2.1
CNOT1-222ENST00000570139 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
CNOT1-222ENST00000570139 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
CNOT1-222ENST00000570139 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
CNOT1-222ENST00000570139 KRTAP20-2Q3LI61 65 aa1.89□□□□□ -2.11
CNOT1-222ENST00000570139 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
CNOT1-222ENST00000570139 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
CNOT1-222ENST00000570139 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
CNOT1-222ENST00000570139 PRM1P04553 51 aa1.48□□□□□ -2.17
CNOT1-222ENST00000570139 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
CNOT1-222ENST00000570139 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
CNOT1-222ENST00000570139 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 164.2 ms