RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
EDC3-217ENST00000569606 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
EDC3-217ENST00000569606 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
EDC3-217ENST00000569606 PRAC1Q96KF2 57 aa4.55□□□□□ -1.68
EDC3-217ENST00000569606 KTN1-AS1Q86SY8 53 aa4.54□□□□□ -1.68
EDC3-217ENST00000569606 MDN1Q9NU22 5596 aa4.53□□□□□ -1.68
EDC3-217ENST00000569606 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
EDC3-217ENST00000569606 SPRR2EP22531 72 aa4.5□□□□□ -1.69
EDC3-217ENST00000569606 SPRR2BP35325 72 aa4.5□□□□□ -1.69
EDC3-217ENST00000569606 SPRR2AP35326 72 aa4.5□□□□□ -1.69
EDC3-217ENST00000569606 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
EDC3-217ENST00000569606 MT1LQ93083 61 aa4.48□□□□□ -1.69
EDC3-217ENST00000569606 KRTAP19-3Q7Z4W3 81 aa4.46□□□□□ -1.7
EDC3-217ENST00000569606 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
EDC3-217ENST00000569606 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
EDC3-217ENST00000569606 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
EDC3-217ENST00000569606 MT1GP13640 62 aa4.41□□□□□ -1.7
EDC3-217ENST00000569606 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
EDC3-217ENST00000569606 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
EDC3-217ENST00000569606 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
EDC3-217ENST00000569606 MT1MQ8N339 61 aa4.35□□□□□ -1.71
EDC3-217ENST00000569606 SPRR2DP22532 72 aa4.34□□□□□ -1.71
EDC3-217ENST00000569606 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
EDC3-217ENST00000569606 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
EDC3-217ENST00000569606 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
EDC3-217ENST00000569606 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
EDC3-217ENST00000569606 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
EDC3-217ENST00000569606 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
EDC3-217ENST00000569606 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
EDC3-217ENST00000569606 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
EDC3-217ENST00000569606 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
EDC3-217ENST00000569606 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
EDC3-217ENST00000569606 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
EDC3-217ENST00000569606 H3BS24 57 aa4.1□□□□□ -1.75
EDC3-217ENST00000569606 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
EDC3-217ENST00000569606 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
EDC3-217ENST00000569606 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
EDC3-217ENST00000569606 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
EDC3-217ENST00000569606 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
EDC3-217ENST00000569606 MT1AP04731 61 aa3.81□□□□□ -1.8
EDC3-217ENST00000569606 KRTAP5-3Q6L8H2 238 aa3.8□□□□□ -1.8
EDC3-217ENST00000569606 MT4P47944 62 aa3.77□□□□□ -1.81
EDC3-217ENST00000569606 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
EDC3-217ENST00000569606 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
EDC3-217ENST00000569606 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
EDC3-217ENST00000569606 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
EDC3-217ENST00000569606 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
EDC3-217ENST00000569606 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
EDC3-217ENST00000569606 AHNAK2Q8IVF2 5795 aa3.64□□□□□ -1.83
EDC3-217ENST00000569606 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
EDC3-217ENST00000569606 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
EDC3-217ENST00000569606 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
EDC3-217ENST00000569606 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
EDC3-217ENST00000569606 MT3P25713 68 aa3.45□□□□□ -1.86
EDC3-217ENST00000569606 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
EDC3-217ENST00000569606 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
EDC3-217ENST00000569606 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
EDC3-217ENST00000569606 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
EDC3-217ENST00000569606 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
EDC3-217ENST00000569606 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
EDC3-217ENST00000569606 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
EDC3-217ENST00000569606 MUC5ACP98088 5654 aa3□□□□□ -1.93
EDC3-217ENST00000569606 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
EDC3-217ENST00000569606 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
EDC3-217ENST00000569606 A0A0A0MQY5 61 aa2.97□□□□□ -1.93
EDC3-217ENST00000569606 INE1O15225 51 aa2.85□□□□□ -1.95
EDC3-217ENST00000569606 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
EDC3-217ENST00000569606 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
EDC3-217ENST00000569606 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
EDC3-217ENST00000569606 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
EDC3-217ENST00000569606 PRM1P04553 51 aa2.54□□□□□ -2
EDC3-217ENST00000569606 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
EDC3-217ENST00000569606 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
EDC3-217ENST00000569606 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
EDC3-217ENST00000569606 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
EDC3-217ENST00000569606 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
EDC3-217ENST00000569606 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
EDC3-217ENST00000569606 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 39.1 ms