RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 MUC12Q9UKN1 5478 aa8.47□□□□□ -1.05
RAB40C-212ENST00000569575 KRTAP19-3Q7Z4W3 81 aa8.46□□□□□ -1.06
RAB40C-212ENST00000569575 NEBP20929 6669 aa8.45□□□□□ -1.06
RAB40C-212ENST00000569575 KRTAP19-4Q3LI73 84 aa8.41□□□□□ -1.06
RAB40C-212ENST00000569575 MT1GP13640 62 aa8.4□□□□□ -1.06
RAB40C-212ENST00000569575 LCE5AQ5TCM9 118 aa8.39□□□□□ -1.07
RAB40C-212ENST00000569575 MT1LQ93083 61 aa8.38□□□□□ -1.07
RAB40C-212ENST00000569575 MDN1Q9NU22 5596 aa8.32□□□□□ -1.08
RAB40C-212ENST00000569575 SPRR2DP22532 72 aa8.31□□□□□ -1.08
RAB40C-212ENST00000569575 KRTAP15-1Q3LI76 137 aa8.28□□□□□ -1.08
RAB40C-212ENST00000569575 KRTAP2-3P0C7H8 128 aa8.17□□□□□ -1.1
RAB40C-212ENST00000569575 MT1MQ8N339 61 aa8.17□□□□□ -1.1
RAB40C-212ENST00000569575 KRTAP2-4Q9BYR9 128 aa8.17□□□□□ -1.1
RAB40C-212ENST00000569575 KTN1-AS1Q86SY8 53 aa8.16□□□□□ -1.1
RAB40C-212ENST00000569575 KRTAP20-1Q3LI63 56 aa8.14□□□□□ -1.11
RAB40C-212ENST00000569575 PRAC1Q96KF2 57 aa8.04□□□□□ -1.12
RAB40C-212ENST00000569575 LCE3BQ5TA77 95 aa8.03□□□□□ -1.12
RAB40C-212ENST00000569575 LCE3CQ5T5A8 94 aa7.98□□□□□ -1.13
RAB40C-212ENST00000569575 KRTAP2-2Q9BYT5 123 aa7.96□□□□□ -1.14
RAB40C-212ENST00000569575 KRTAP2-1Q9BYU5 128 aa7.96□□□□□ -1.14
RAB40C-212ENST00000569575 KRTAP4-7Q9BYR0 210 aa7.87□□□□□ -1.15
RAB40C-212ENST00000569575 KRTAP4-3Q9BYR4 195 aa7.82□□□□□ -1.16
RAB40C-212ENST00000569575 DSTQ03001 7570 aaKnown RBP7.72□□□□□ -1.17
RAB40C-212ENST00000569575 LCE4AQ5TA78 99 aa7.49□□□□□ -1.21
RAB40C-212ENST00000569575 KRTAP5-5Q701N2 237 aaPredicted RBP7.45□□□□□ -1.22
RAB40C-212ENST00000569575 LOC100996750A0A140TA64 210 aa7.43□□□□□ -1.22
RAB40C-212ENST00000569575 KRTAP5-4Q6L8H1 288 aa7.43□□□□□ -1.22
RAB40C-212ENST00000569575 KRTAP9-6A8MVA2 160 aa7.38□□□□□ -1.23
RAB40C-212ENST00000569575 SPRR5A0A1B0GTR4 108 aa7.37□□□□□ -1.23
RAB40C-212ENST00000569575 MT1AP04731 61 aa7.18□□□□□ -1.26
RAB40C-212ENST00000569575 KRTAP4-9Q9BYQ8 210 aa7.17□□□□□ -1.26
RAB40C-212ENST00000569575 KRTAP12-4P60329 112 aa7.16□□□□□ -1.26
RAB40C-212ENST00000569575 LCE1DQ5T752 114 aa7.16□□□□□ -1.26
RAB40C-212ENST00000569575 MT4P47944 62 aa7.14□□□□□ -1.27
RAB40C-212ENST00000569575 KRTAP4-6Q9BYQ5 205 aa7.02□□□□□ -1.29
RAB40C-212ENST00000569575 KRTAP6-1Q3LI64 71 aa7□□□□□ -1.29
RAB40C-212ENST00000569575 KRTAP20-2Q3LI61 65 aa6.92□□□□□ -1.3
RAB40C-212ENST00000569575 LUZP6Q538Z0 58 aa6.9□□□□□ -1.3
RAB40C-212ENST00000569575 KRTAP9-4Q9BYQ2 154 aa6.87□□□□□ -1.31
RAB40C-212ENST00000569575 SYNE1Q8NF91 8797 aaKnown RBP6.86□□□□□ -1.31
RAB40C-212ENST00000569575 HMCN1Q96RW7 5635 aa6.86□□□□□ -1.31
RAB40C-212ENST00000569575 KRTAP5-3Q6L8H2 238 aa6.71□□□□□ -1.34
RAB40C-212ENST00000569575 KRTAP5-2Q701N4 177 aa6.63□□□□□ -1.35
RAB40C-212ENST00000569575 MT3P25713 68 aa6.58□□□□□ -1.36
RAB40C-212ENST00000569575 KRTAP6-2Q3LI66 62 aa6.57□□□□□ -1.36
RAB40C-212ENST00000569575 H3BS24 57 aa6.38□□□□□ -1.39
RAB40C-212ENST00000569575 KRTAP5-10Q6L8G5 202 aa6.32□□□□□ -1.4
RAB40C-212ENST00000569575 AHNAK2Q8IVF2 5795 aa6.31□□□□□ -1.4
RAB40C-212ENST00000569575 GPR98Q8WXG9 6306 aa6.19□□□□□ -1.42
RAB40C-212ENST00000569575 KRTAP4-11Q9BYQ6 195 aa6.17□□□□□ -1.42
RAB40C-212ENST00000569575 NDUFAF8A1L188 74 aa6.12□□□□□ -1.43
RAB40C-212ENST00000569575 KRTAP5-7Q6L8G8 165 aa6.03□□□□□ -1.44
RAB40C-212ENST00000569575 KRTAP5-8O75690 187 aa5.93□□□□□ -1.46
RAB40C-212ENST00000569575 LCE1EQ5T753 118 aa5.92□□□□□ -1.46
RAB40C-212ENST00000569575 LCE3DQ9BYE3 92 aa5.91□□□□□ -1.46
RAB40C-212ENST00000569575 OBSCNQ5VST9 7968 aa5.87□□□□□ -1.47
RAB40C-212ENST00000569575 KRTAP5-1Q6L8H4 278 aa5.79□□□□□ -1.48
RAB40C-212ENST00000569575 LCE3EQ5T5B0 92 aa5.69□□□□□ -1.5
RAB40C-212ENST00000569575 KRTAP9-9Q9BYP9 154 aa5.54□□□□□ -1.52
RAB40C-212ENST00000569575 LCE1CQ5T751 118 aa5.47□□□□□ -1.53
RAB40C-212ENST00000569575 LCE1BQ5T7P3 118 aa5.47□□□□□ -1.53
RAB40C-212ENST00000569575 MUC5ACP98088 5654 aa5.43□□□□□ -1.54
RAB40C-212ENST00000569575 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.54
RAB40C-212ENST00000569575 A0A0A0MQY5 61 aa5.39□□□□□ -1.55
RAB40C-212ENST00000569575 INE1O15225 51 aa5.22□□□□□ -1.57
RAB40C-212ENST00000569575 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
RAB40C-212ENST00000569575 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.08□□□□□ -1.6
RAB40C-212ENST00000569575 AHNAKQ09666 5890 aaKnown RBP4.98□□□□□ -1.61
RAB40C-212ENST00000569575 KRTAP5-11Q6L8G4 156 aa4.87□□□□□ -1.63
RAB40C-212ENST00000569575 LCE1FQ5T754 118 aa4.65□□□□□ -1.67
RAB40C-212ENST00000569575 KRTAP21-2Q3LI59 83 aa4.64□□□□□ -1.67
RAB40C-212ENST00000569575 PRM1P04553 51 aa4.59□□□□□ -1.67
RAB40C-212ENST00000569575 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
RAB40C-212ENST00000569575 PHGR1C9JFL3 82 aa4.17□□□□□ -1.74
RAB40C-212ENST00000569575 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
RAB40C-212ENST00000569575 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
RAB40C-212ENST00000569575 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
RAB40C-212ENST00000569575 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 100.1 ms