RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 KRTAP10-12P60413 245 aa4.98□□□□□ -1.61
NSMCE1-214ENST00000569236 KRTAP4-8A0A0G2JLE6 195 aa4.96□□□□□ -1.61
NSMCE1-214ENST00000569236 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.61
NSMCE1-214ENST00000569236 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
NSMCE1-214ENST00000569236 MDN1Q9NU22 5596 aa4.92□□□□□ -1.62
NSMCE1-214ENST00000569236 INE1O15225 51 aa4.91□□□□□ -1.62
NSMCE1-214ENST00000569236 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
NSMCE1-214ENST00000569236 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
NSMCE1-214ENST00000569236 SPRR2EP22531 72 aa4.84□□□□□ -1.63
NSMCE1-214ENST00000569236 SPRR2BP35325 72 aa4.84□□□□□ -1.63
NSMCE1-214ENST00000569236 SPRR2AP35326 72 aa4.84□□□□□ -1.63
NSMCE1-214ENST00000569236 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
NSMCE1-214ENST00000569236 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
NSMCE1-214ENST00000569236 KRTAP20-1Q3LI63 56 aa4.76□□□□□ -1.65
NSMCE1-214ENST00000569236 KRTAP2-3P0C7H8 128 aa4.68□□□□□ -1.66
NSMCE1-214ENST00000569236 SPRR2DP22532 72 aa4.68□□□□□ -1.66
NSMCE1-214ENST00000569236 KRTAP2-4Q9BYR9 128 aa4.68□□□□□ -1.66
NSMCE1-214ENST00000569236 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
NSMCE1-214ENST00000569236 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
NSMCE1-214ENST00000569236 MT1EP04732 61 aa4.63□□□□□ -1.67
NSMCE1-214ENST00000569236 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
NSMCE1-214ENST00000569236 KRTAP19-5Q3LI72 72 aa4.61□□□□□ -1.67
NSMCE1-214ENST00000569236 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
NSMCE1-214ENST00000569236 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
NSMCE1-214ENST00000569236 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
NSMCE1-214ENST00000569236 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
NSMCE1-214ENST00000569236 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
NSMCE1-214ENST00000569236 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
NSMCE1-214ENST00000569236 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
NSMCE1-214ENST00000569236 MT1GP13640 62 aa4.48□□□□□ -1.69
NSMCE1-214ENST00000569236 LCE4AQ5TA78 99 aa4.48□□□□□ -1.69
NSMCE1-214ENST00000569236 DSTQ03001 7570 aaKnown RBP4.47□□□□□ -1.69
NSMCE1-214ENST00000569236 MT1LQ93083 61 aa4.45□□□□□ -1.7
NSMCE1-214ENST00000569236 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
NSMCE1-214ENST00000569236 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
NSMCE1-214ENST00000569236 MT1MQ8N339 61 aa4.4□□□□□ -1.7
NSMCE1-214ENST00000569236 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
NSMCE1-214ENST00000569236 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
NSMCE1-214ENST00000569236 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
NSMCE1-214ENST00000569236 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
NSMCE1-214ENST00000569236 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.76
NSMCE1-214ENST00000569236 MT4P47944 62 aa4.08□□□□□ -1.76
NSMCE1-214ENST00000569236 HMCN1Q96RW7 5635 aa4.03□□□□□ -1.76
NSMCE1-214ENST00000569236 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
NSMCE1-214ENST00000569236 KRTAP5-3Q6L8H2 238 aa3.91□□□□□ -1.78
NSMCE1-214ENST00000569236 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
NSMCE1-214ENST00000569236 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.79
NSMCE1-214ENST00000569236 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
NSMCE1-214ENST00000569236 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
NSMCE1-214ENST00000569236 MT1AP04731 61 aa3.8□□□□□ -1.8
NSMCE1-214ENST00000569236 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
NSMCE1-214ENST00000569236 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
NSMCE1-214ENST00000569236 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
NSMCE1-214ENST00000569236 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
NSMCE1-214ENST00000569236 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
NSMCE1-214ENST00000569236 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
NSMCE1-214ENST00000569236 MT3P25713 68 aa3.54□□□□□ -1.84
NSMCE1-214ENST00000569236 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.84
NSMCE1-214ENST00000569236 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
NSMCE1-214ENST00000569236 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
NSMCE1-214ENST00000569236 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
NSMCE1-214ENST00000569236 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
NSMCE1-214ENST00000569236 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
NSMCE1-214ENST00000569236 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
NSMCE1-214ENST00000569236 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
NSMCE1-214ENST00000569236 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
NSMCE1-214ENST00000569236 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
NSMCE1-214ENST00000569236 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
NSMCE1-214ENST00000569236 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
NSMCE1-214ENST00000569236 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
NSMCE1-214ENST00000569236 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
NSMCE1-214ENST00000569236 PRM1P04553 51 aa2.88□□□□□ -1.95
NSMCE1-214ENST00000569236 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
NSMCE1-214ENST00000569236 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
NSMCE1-214ENST00000569236 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
NSMCE1-214ENST00000569236 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
NSMCE1-214ENST00000569236 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
NSMCE1-214ENST00000569236 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 7.1 ms