RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, humanhuman

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-223ENST00000569050 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
PKM-223ENST00000569050 A8MU10 97 aa6.16□□□□□ -1.42
PKM-223ENST00000569050 MT1GP13640 62 aa6.15□□□□□ -1.42
PKM-223ENST00000569050 SMIM26A0A096LP01 95 aa6.12□□□□□ -1.43
PKM-223ENST00000569050 KRTAP12-1P59990 96 aa6.11□□□□□ -1.43
PKM-223ENST00000569050 PP632Q6XCG6 107 aa6.08□□□□□ -1.44
PKM-223ENST00000569050 MT1MQ8N339 61 aa6.08□□□□□ -1.44
PKM-223ENST00000569050 PSPHP1O15172 72 aa6.05□□□□□ -1.44
PKM-223ENST00000569050 V9GYY9 64 aa6.03□□□□□ -1.44
PKM-223ENST00000569050 UQCR11O14957 56 aa6.02□□□□□ -1.45
PKM-223ENST00000569050 Q1T7F1 81 aa6□□□□□ -1.45
PKM-223ENST00000569050 KRTAP19-5Q3LI72 72 aa6□□□□□ -1.45
PKM-223ENST00000569050 KRTAP4-3Q9BYR4 195 aa6□□□□□ -1.45
PKM-223ENST00000569050 MIR22HGQ0VDD5 57 aa5.95□□□□□ -1.46
PKM-223ENST00000569050 MT1LQ93083 61 aa5.93□□□□□ -1.46
PKM-223ENST00000569050 KRTAP20-2Q3LI61 65 aa5.92□□□□□ -1.46
PKM-223ENST00000569050 RPS28P62857 69 aaKnown RBP5.91□□□□□ -1.46
PKM-223ENST00000569050 A6NED7 52 aa5.85□□□□□ -1.47
PKM-223ENST00000569050 C10orf95Q9H7T3 257 aa5.81□□□□□ -1.48
PKM-223ENST00000569050 K7ERS5 55 aa5.76□□□□□ -1.49
PKM-223ENST00000569050 TNP1P09430 55 aa5.73□□□□□ -1.49
PKM-223ENST00000569050 AHNAKQ09666 5890 aaKnown RBP5.72□□□□□ -1.49
PKM-223ENST00000569050 SYNE1Q8NF91 8797 aaKnown RBP5.68□□□□□ -1.5
PKM-223ENST00000569050 LCE3AQ5TA76 89 aa5.65□□□□□ -1.5
PKM-223ENST00000569050 KRTAP5-5Q701N2 237 aaPredicted RBP5.65□□□□□ -1.5
PKM-223ENST00000569050 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
PKM-223ENST00000569050 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
PKM-223ENST00000569050 MUC5BQ9HC84 5762 aaPredicted RBP5.63□□□□□ -1.51
PKM-223ENST00000569050 MUC5ACP98088 5654 aa5.62□□□□□ -1.51
PKM-223ENST00000569050 CDC42SE1Q9NRR8 79 aa5.6□□□□□ -1.51
PKM-223ENST00000569050 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
PKM-223ENST00000569050 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
PKM-223ENST00000569050 KRTAP5-8O75690 187 aa5.45□□□□□ -1.54
PKM-223ENST00000569050 ROMO1P60602 79 aa5.44□□□□□ -1.54
PKM-223ENST00000569050 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
PKM-223ENST00000569050 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
PKM-223ENST00000569050 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
PKM-223ENST00000569050 KRTAP5-2Q701N4 177 aa5.33□□□□□ -1.56
PKM-223ENST00000569050 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
PKM-223ENST00000569050 KRTAP9-9Q9BYP9 154 aa5.23□□□□□ -1.57
PKM-223ENST00000569050 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.58
PKM-223ENST00000569050 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
PKM-223ENST00000569050 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
PKM-223ENST00000569050 PMAIP1Q13794 54 aa5.03□□□□□ -1.6
PKM-223ENST00000569050 MT1AP04731 61 aa5.02□□□□□ -1.61
PKM-223ENST00000569050 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
PKM-223ENST00000569050 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
PKM-223ENST00000569050 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
PKM-223ENST00000569050 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
PKM-223ENST00000569050 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
PKM-223ENST00000569050 PRO0628Q9UI54 55 aa4.88□□□□□ -1.63
PKM-223ENST00000569050 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
PKM-223ENST00000569050 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
PKM-223ENST00000569050 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
PKM-223ENST00000569050 MT3P25713 68 aa4.6□□□□□ -1.67
PKM-223ENST00000569050 SVIPQ8NHG7 77 aa4.5□□□□□ -1.69
PKM-223ENST00000569050 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
PKM-223ENST00000569050 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
PKM-223ENST00000569050 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
PKM-223ENST00000569050 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
PKM-223ENST00000569050 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
PKM-223ENST00000569050 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
PKM-223ENST00000569050 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
PKM-223ENST00000569050 PHGR1C9JFL3 82 aa3.85□□□□□ -1.79
PKM-223ENST00000569050 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
PKM-223ENST00000569050 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
PKM-223ENST00000569050 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
PKM-223ENST00000569050 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
PKM-223ENST00000569050 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
PKM-223ENST00000569050 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
PKM-223ENST00000569050 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
PKM-223ENST00000569050 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
PKM-223ENST00000569050 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
PKM-223ENST00000569050 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
PKM-223ENST00000569050 PRM1P04553 51 aa2.84□□□□□ -1.95
PKM-223ENST00000569050 INE1O15225 51 aa2.8□□□□□ -1.96
PKM-223ENST00000569050 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
PKM-223ENST00000569050 H3BS24 57 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 7.8 ms