RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
CPNE7-209ENST00000568977 TNP1P09430 55 aa6.55□□□□□ -1.36
CPNE7-209ENST00000568977 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
CPNE7-209ENST00000568977 MT4P47944 62 aa6.48□□□□□ -1.37
CPNE7-209ENST00000568977 KRTAP4-3Q9BYR4 195 aa6.48□□□□□ -1.37
CPNE7-209ENST00000568977 HMCN1Q96RW7 5635 aa6.46□□□□□ -1.38
CPNE7-209ENST00000568977 UQCR11O14957 56 aa6.38□□□□□ -1.39
CPNE7-209ENST00000568977 KRTAP5-4Q6L8H1 288 aa6.38□□□□□ -1.39
CPNE7-209ENST00000568977 AHNAK2Q8IVF2 5795 aa6.33□□□□□ -1.4
CPNE7-209ENST00000568977 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
CPNE7-209ENST00000568977 V9GYY9 64 aa6.31□□□□□ -1.4
CPNE7-209ENST00000568977 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
CPNE7-209ENST00000568977 KRTAP4-6Q9BYQ5 205 aa6.28□□□□□ -1.4
CPNE7-209ENST00000568977 Q1T7F1 81 aa6.25□□□□□ -1.41
CPNE7-209ENST00000568977 MIR22HGQ0VDD5 57 aa6.24□□□□□ -1.41
CPNE7-209ENST00000568977 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
CPNE7-209ENST00000568977 PSPHP1O15172 72 aa6.19□□□□□ -1.42
CPNE7-209ENST00000568977 KRTAP5-10Q6L8G5 202 aa6.16□□□□□ -1.42
CPNE7-209ENST00000568977 K7ERS5 55 aa6.12□□□□□ -1.43
CPNE7-209ENST00000568977 KRTAP25-1Q3LHN0 102 aa6.12□□□□□ -1.43
CPNE7-209ENST00000568977 KRTAP5-5Q701N2 237 aaPredicted RBP6.09□□□□□ -1.43
CPNE7-209ENST00000568977 KRTAP20-2Q3LI61 65 aa6.04□□□□□ -1.44
CPNE7-209ENST00000568977 A6NED7 52 aa6.02□□□□□ -1.45
CPNE7-209ENST00000568977 KRTAP5-3Q6L8H2 238 aa6□□□□□ -1.45
CPNE7-209ENST00000568977 SPRR5A0A1B0GTR4 108 aa5.98□□□□□ -1.45
CPNE7-209ENST00000568977 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
CPNE7-209ENST00000568977 KRTAP12-4P60329 112 aa5.94□□□□□ -1.46
CPNE7-209ENST00000568977 KRTAP5-7Q6L8G8 165 aa5.93□□□□□ -1.46
CPNE7-209ENST00000568977 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
CPNE7-209ENST00000568977 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
CPNE7-209ENST00000568977 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
CPNE7-209ENST00000568977 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
CPNE7-209ENST00000568977 CDC42SE1Q9NRR8 79 aa5.81□□□□□ -1.48
CPNE7-209ENST00000568977 LCE3CQ5T5A8 94 aa5.79□□□□□ -1.48
CPNE7-209ENST00000568977 ROMO1P60602 79 aa5.71□□□□□ -1.5
CPNE7-209ENST00000568977 MT1AP04731 61 aa5.63□□□□□ -1.51
CPNE7-209ENST00000568977 KRTAP6-1Q3LI64 71 aa5.61□□□□□ -1.51
CPNE7-209ENST00000568977 KRTAP5-2Q701N4 177 aa5.58□□□□□ -1.52
CPNE7-209ENST00000568977 KRTAP4-11Q9BYQ6 195 aa5.53□□□□□ -1.52
CPNE7-209ENST00000568977 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
CPNE7-209ENST00000568977 BRK1Q8WUW1 75 aa5.49□□□□□ -1.53
CPNE7-209ENST00000568977 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
CPNE7-209ENST00000568977 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
CPNE7-209ENST00000568977 KRTAP6-2Q3LI66 62 aa5.37□□□□□ -1.55
CPNE7-209ENST00000568977 KRTAP5-8O75690 187 aa5.36□□□□□ -1.55
CPNE7-209ENST00000568977 OBSCNQ5VST9 7968 aa5.3□□□□□ -1.56
CPNE7-209ENST00000568977 AHNAKQ09666 5890 aaKnown RBP5.23□□□□□ -1.57
CPNE7-209ENST00000568977 MUC5ACP98088 5654 aa5.21□□□□□ -1.58
CPNE7-209ENST00000568977 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
CPNE7-209ENST00000568977 MUC5BQ9HC84 5762 aaPredicted RBP5.17□□□□□ -1.58
CPNE7-209ENST00000568977 MT3P25713 68 aa5.14□□□□□ -1.59
CPNE7-209ENST00000568977 KRTAP9-9Q9BYP9 154 aa5.09□□□□□ -1.59
CPNE7-209ENST00000568977 KRTAP5-1Q6L8H4 278 aa5.02□□□□□ -1.61
CPNE7-209ENST00000568977 KTN1-AS1Q86SY8 53 aa4.99□□□□□ -1.61
CPNE7-209ENST00000568977 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
CPNE7-209ENST00000568977 SVIPQ8NHG7 77 aa4.85□□□□□ -1.63
CPNE7-209ENST00000568977 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
CPNE7-209ENST00000568977 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
CPNE7-209ENST00000568977 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
CPNE7-209ENST00000568977 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
CPNE7-209ENST00000568977 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
CPNE7-209ENST00000568977 KRTAP4-12Q9BQ66 201 aa4.12□□□□□ -1.75
CPNE7-209ENST00000568977 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
CPNE7-209ENST00000568977 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
CPNE7-209ENST00000568977 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
CPNE7-209ENST00000568977 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
CPNE7-209ENST00000568977 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
CPNE7-209ENST00000568977 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
CPNE7-209ENST00000568977 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
CPNE7-209ENST00000568977 PHGR1C9JFL3 82 aa3.6□□□□□ -1.83
CPNE7-209ENST00000568977 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
CPNE7-209ENST00000568977 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
CPNE7-209ENST00000568977 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
CPNE7-209ENST00000568977 H3BS24 57 aa3.26□□□□□ -1.89
CPNE7-209ENST00000568977 INE1O15225 51 aa3.19□□□□□ -1.9
CPNE7-209ENST00000568977 PRM1P04553 51 aa2.92□□□□□ -1.94
CPNE7-209ENST00000568977 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
CPNE7-209ENST00000568977 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 27.8 ms