RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
GGA2-213ENST00000568922 MT1EP04732 61 aa4.59□□□□□ -1.67
GGA2-213ENST00000568922 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
GGA2-213ENST00000568922 SPRR2FQ96RM1 72 aa4.53□□□□□ -1.68
GGA2-213ENST00000568922 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
GGA2-213ENST00000568922 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
GGA2-213ENST00000568922 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
GGA2-213ENST00000568922 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
GGA2-213ENST00000568922 MT1LQ93083 61 aa4.49□□□□□ -1.69
GGA2-213ENST00000568922 KRTAP6-3Q3LI67 103 aa4.46□□□□□ -1.7
GGA2-213ENST00000568922 KRTAP19-3Q7Z4W3 81 aa4.44□□□□□ -1.7
GGA2-213ENST00000568922 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
GGA2-213ENST00000568922 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
GGA2-213ENST00000568922 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
GGA2-213ENST00000568922 LCE4AQ5TA78 99 aa4.4□□□□□ -1.7
GGA2-213ENST00000568922 MT1GP13640 62 aa4.39□□□□□ -1.71
GGA2-213ENST00000568922 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
GGA2-213ENST00000568922 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
GGA2-213ENST00000568922 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
GGA2-213ENST00000568922 LCE5AQ5TCM9 118 aa4.35□□□□□ -1.71
GGA2-213ENST00000568922 LCE1AQ5T7P2 110 aa4.34□□□□□ -1.71
GGA2-213ENST00000568922 KRTAP4-11Q9BYQ6 195 aa4.34□□□□□ -1.71
GGA2-213ENST00000568922 KRTAP9-7A8MTY7 169 aa4.32□□□□□ -1.72
GGA2-213ENST00000568922 SPRR2EP22531 72 aa4.32□□□□□ -1.72
GGA2-213ENST00000568922 SPRR2BP35325 72 aa4.32□□□□□ -1.72
GGA2-213ENST00000568922 SPRR2AP35326 72 aa4.32□□□□□ -1.72
GGA2-213ENST00000568922 MT1MQ8N339 61 aa4.32□□□□□ -1.72
GGA2-213ENST00000568922 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
GGA2-213ENST00000568922 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
GGA2-213ENST00000568922 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
GGA2-213ENST00000568922 SPRR2DP22532 72 aa4.16□□□□□ -1.74
GGA2-213ENST00000568922 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
GGA2-213ENST00000568922 NEBP20929 6669 aa4.05□□□□□ -1.76
GGA2-213ENST00000568922 DSTQ03001 7570 aaKnown RBP3.98□□□□□ -1.77
GGA2-213ENST00000568922 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
GGA2-213ENST00000568922 KRTAP2-3P0C7H8 128 aa3.91□□□□□ -1.78
GGA2-213ENST00000568922 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
GGA2-213ENST00000568922 KRTAP2-4Q9BYR9 128 aa3.91□□□□□ -1.78
GGA2-213ENST00000568922 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
GGA2-213ENST00000568922 MT1AP04731 61 aa3.83□□□□□ -1.8
GGA2-213ENST00000568922 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
GGA2-213ENST00000568922 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
GGA2-213ENST00000568922 INE1O15225 51 aa3.81□□□□□ -1.8
GGA2-213ENST00000568922 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
GGA2-213ENST00000568922 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
GGA2-213ENST00000568922 KRTAP12-4P60329 112 aa3.65□□□□□ -1.82
GGA2-213ENST00000568922 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
GGA2-213ENST00000568922 GPR98Q8WXG9 6306 aa3.62□□□□□ -1.83
GGA2-213ENST00000568922 MT4P47944 62 aa3.6□□□□□ -1.83
GGA2-213ENST00000568922 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
GGA2-213ENST00000568922 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
GGA2-213ENST00000568922 MT3P25713 68 aa3.48□□□□□ -1.85
GGA2-213ENST00000568922 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.86
GGA2-213ENST00000568922 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.87
GGA2-213ENST00000568922 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
GGA2-213ENST00000568922 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
GGA2-213ENST00000568922 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
GGA2-213ENST00000568922 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
GGA2-213ENST00000568922 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
GGA2-213ENST00000568922 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
GGA2-213ENST00000568922 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
GGA2-213ENST00000568922 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
GGA2-213ENST00000568922 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
GGA2-213ENST00000568922 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
GGA2-213ENST00000568922 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
GGA2-213ENST00000568922 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
GGA2-213ENST00000568922 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
GGA2-213ENST00000568922 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
GGA2-213ENST00000568922 PRM1P04553 51 aa2.77□□□□□ -1.97
GGA2-213ENST00000568922 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
GGA2-213ENST00000568922 MUC5ACP98088 5654 aa2.72□□□□□ -1.97
GGA2-213ENST00000568922 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
GGA2-213ENST00000568922 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
GGA2-213ENST00000568922 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
GGA2-213ENST00000568922 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
GGA2-213ENST00000568922 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
GGA2-213ENST00000568922 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
GGA2-213ENST00000568922 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms