RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 TNP1P09430 55 aa3.9□□□□□ -1.79
CNOT1-214ENST00000568917 KRTAP10-5P60370 271 aa3.9□□□□□ -1.79
CNOT1-214ENST00000568917 PRO2289Q9P1D8 64 aa3.89□□□□□ -1.79
CNOT1-214ENST00000568917 KRTAP10-12P60413 245 aa3.88□□□□□ -1.79
CNOT1-214ENST00000568917 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
CNOT1-214ENST00000568917 MT1XP80297 61 aa3.86□□□□□ -1.79
CNOT1-214ENST00000568917 CRCT1Q9UGL9 99 aa3.8□□□□□ -1.8
CNOT1-214ENST00000568917 FSIP2Q5CZC0 6907 aa3.79□□□□□ -1.8
CNOT1-214ENST00000568917 KRTAP19-6Q3LI70 58 aa3.73□□□□□ -1.81
CNOT1-214ENST00000568917 USH2AO75445 5202 aa3.73□□□□□ -1.81
CNOT1-214ENST00000568917 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.81
CNOT1-214ENST00000568917 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
CNOT1-214ENST00000568917 LCE3AQ5TA76 89 aa3.66□□□□□ -1.82
CNOT1-214ENST00000568917 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
CNOT1-214ENST00000568917 SSPOA2VEC9 5147 aa3.64□□□□□ -1.83
CNOT1-214ENST00000568917 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
CNOT1-214ENST00000568917 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
CNOT1-214ENST00000568917 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
CNOT1-214ENST00000568917 KRTAP19-5Q3LI72 72 aa3.47□□□□□ -1.85
CNOT1-214ENST00000568917 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
CNOT1-214ENST00000568917 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
CNOT1-214ENST00000568917 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
CNOT1-214ENST00000568917 KMT2DO14686 5537 aa3.4□□□□□ -1.87
CNOT1-214ENST00000568917 MT1EP04732 61 aa3.39□□□□□ -1.87
CNOT1-214ENST00000568917 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
CNOT1-214ENST00000568917 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
CNOT1-214ENST00000568917 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
CNOT1-214ENST00000568917 MT1LQ93083 61 aa3.33□□□□□ -1.88
CNOT1-214ENST00000568917 SYNE2Q8WXH0 6885 aaKnown RBP3.29□□□□□ -1.88
CNOT1-214ENST00000568917 MACF1Q9UPN3 7388 aaKnown RBP3.29□□□□□ -1.88
CNOT1-214ENST00000568917 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
CNOT1-214ENST00000568917 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
CNOT1-214ENST00000568917 SPRR2FQ96RM1 72 aa3.27□□□□□ -1.89
CNOT1-214ENST00000568917 MT1GP13640 62 aa3.26□□□□□ -1.89
CNOT1-214ENST00000568917 KRTAP6-3Q3LI67 103 aa3.2□□□□□ -1.9
CNOT1-214ENST00000568917 MT1MQ8N339 61 aa3.19□□□□□ -1.9
CNOT1-214ENST00000568917 MUC12Q9UKN1 5478 aa3.15□□□□□ -1.91
CNOT1-214ENST00000568917 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
CNOT1-214ENST00000568917 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
CNOT1-214ENST00000568917 SPRR2EP22531 72 aa3.1□□□□□ -1.91
CNOT1-214ENST00000568917 SPRR2BP35325 72 aa3.1□□□□□ -1.91
CNOT1-214ENST00000568917 SPRR2AP35326 72 aa3.1□□□□□ -1.91
CNOT1-214ENST00000568917 NEBP20929 6669 aa3.09□□□□□ -1.92
CNOT1-214ENST00000568917 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
CNOT1-214ENST00000568917 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
CNOT1-214ENST00000568917 SPRR2DP22532 72 aa2.99□□□□□ -1.93
CNOT1-214ENST00000568917 KRTAP2-3P0C7H8 128 aa2.93□□□□□ -1.94
CNOT1-214ENST00000568917 KRTAP2-4Q9BYR9 128 aa2.93□□□□□ -1.94
CNOT1-214ENST00000568917 KRTAP2-1Q9BYU5 128 aa2.93□□□□□ -1.94
CNOT1-214ENST00000568917 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
CNOT1-214ENST00000568917 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
CNOT1-214ENST00000568917 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
CNOT1-214ENST00000568917 MT1AP04731 61 aa2.85□□□□□ -1.95
CNOT1-214ENST00000568917 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
CNOT1-214ENST00000568917 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
CNOT1-214ENST00000568917 INE1O15225 51 aa2.74□□□□□ -1.97
CNOT1-214ENST00000568917 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
CNOT1-214ENST00000568917 LCE1CQ5T751 118 aa2.71□□□□□ -1.98
CNOT1-214ENST00000568917 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
CNOT1-214ENST00000568917 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
CNOT1-214ENST00000568917 SYNE1Q8NF91 8797 aaKnown RBP2.59□□□□□ -1.99
CNOT1-214ENST00000568917 MT4P47944 62 aa2.55□□□□□ -2
CNOT1-214ENST00000568917 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
CNOT1-214ENST00000568917 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
CNOT1-214ENST00000568917 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
CNOT1-214ENST00000568917 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
CNOT1-214ENST00000568917 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
CNOT1-214ENST00000568917 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
CNOT1-214ENST00000568917 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
CNOT1-214ENST00000568917 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
CNOT1-214ENST00000568917 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
CNOT1-214ENST00000568917 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
CNOT1-214ENST00000568917 PRM1P04553 51 aa2.12□□□□□ -2.07
CNOT1-214ENST00000568917 MUC5ACP98088 5654 aa2.09□□□□□ -2.08
CNOT1-214ENST00000568917 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
CNOT1-214ENST00000568917 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
CNOT1-214ENST00000568917 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.2
CNOT1-214ENST00000568917 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms