RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 TNP1P09430 55 aa3.86□□□□□ -1.79
UBR1-207ENST00000568782 UQCR11O14957 56 aa3.84□□□□□ -1.79
UBR1-207ENST00000568782 KRTAP19-7Q3SYF9 63 aa3.84□□□□□ -1.79
UBR1-207ENST00000568782 MT1EP04732 61 aa3.83□□□□□ -1.8
UBR1-207ENST00000568782 KRTAP19-3Q7Z4W3 81 aa3.83□□□□□ -1.8
UBR1-207ENST00000568782 V9GYY9 64 aa3.82□□□□□ -1.8
UBR1-207ENST00000568782 LCE5AQ5TCM9 118 aa3.81□□□□□ -1.8
UBR1-207ENST00000568782 PP632Q6XCG6 107 aa3.81□□□□□ -1.8
UBR1-207ENST00000568782 KRTAP19-5Q3LI72 72 aa3.8□□□□□ -1.8
UBR1-207ENST00000568782 K7ERS5 55 aa3.77□□□□□ -1.81
UBR1-207ENST00000568782 MT1GP13640 62 aa3.77□□□□□ -1.81
UBR1-207ENST00000568782 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
UBR1-207ENST00000568782 MIR22HGQ0VDD5 57 aa3.73□□□□□ -1.81
UBR1-207ENST00000568782 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
UBR1-207ENST00000568782 MT1LQ93083 61 aa3.67□□□□□ -1.82
UBR1-207ENST00000568782 DSTQ03001 7570 aaKnown RBP3.66□□□□□ -1.82
UBR1-207ENST00000568782 PSPHP1O15172 72 aa3.65□□□□□ -1.83
UBR1-207ENST00000568782 MT1MQ8N339 61 aa3.65□□□□□ -1.83
UBR1-207ENST00000568782 KRTAP25-1Q3LHN0 102 aa3.64□□□□□ -1.83
UBR1-207ENST00000568782 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
UBR1-207ENST00000568782 Q1T7F1 81 aa3.63□□□□□ -1.83
UBR1-207ENST00000568782 KRTAP12-3P60328 96 aa3.62□□□□□ -1.83
UBR1-207ENST00000568782 A6NED7 52 aa3.58□□□□□ -1.84
UBR1-207ENST00000568782 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
UBR1-207ENST00000568782 MT4P47944 62 aa3.53□□□□□ -1.84
UBR1-207ENST00000568782 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
UBR1-207ENST00000568782 PRO0628Q9UI54 55 aa3.51□□□□□ -1.85
UBR1-207ENST00000568782 CDC42SE1Q9NRR8 79 aa3.5□□□□□ -1.85
UBR1-207ENST00000568782 KRTAP19-4Q3LI73 84 aa3.49□□□□□ -1.85
UBR1-207ENST00000568782 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.86
UBR1-207ENST00000568782 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
UBR1-207ENST00000568782 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
UBR1-207ENST00000568782 ROMO1P60602 79 aa3.41□□□□□ -1.86
UBR1-207ENST00000568782 KRTAP15-1Q3LI76 137 aa3.41□□□□□ -1.86
UBR1-207ENST00000568782 PMAIP1Q13794 54 aa3.36□□□□□ -1.87
UBR1-207ENST00000568782 KRTAP12-4P60329 112 aa3.35□□□□□ -1.87
UBR1-207ENST00000568782 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.87
UBR1-207ENST00000568782 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
UBR1-207ENST00000568782 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
UBR1-207ENST00000568782 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
UBR1-207ENST00000568782 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
UBR1-207ENST00000568782 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
UBR1-207ENST00000568782 KRTAP5-10Q6L8G5 202 aa3.24□□□□□ -1.89
UBR1-207ENST00000568782 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
UBR1-207ENST00000568782 MT1AP04731 61 aa3.14□□□□□ -1.91
UBR1-207ENST00000568782 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
UBR1-207ENST00000568782 KTN1-AS1Q86SY8 53 aa3.11□□□□□ -1.91
UBR1-207ENST00000568782 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
UBR1-207ENST00000568782 BRK1Q8WUW1 75 aa3.09□□□□□ -1.91
UBR1-207ENST00000568782 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
UBR1-207ENST00000568782 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
UBR1-207ENST00000568782 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
UBR1-207ENST00000568782 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
UBR1-207ENST00000568782 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
UBR1-207ENST00000568782 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
UBR1-207ENST00000568782 MT3P25713 68 aa2.92□□□□□ -1.94
UBR1-207ENST00000568782 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
UBR1-207ENST00000568782 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
UBR1-207ENST00000568782 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
UBR1-207ENST00000568782 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
UBR1-207ENST00000568782 LCE1EQ5T753 118 aa2.65□□□□□ -1.99
UBR1-207ENST00000568782 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
UBR1-207ENST00000568782 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
UBR1-207ENST00000568782 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
UBR1-207ENST00000568782 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
UBR1-207ENST00000568782 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
UBR1-207ENST00000568782 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
UBR1-207ENST00000568782 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
UBR1-207ENST00000568782 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
UBR1-207ENST00000568782 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
UBR1-207ENST00000568782 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
UBR1-207ENST00000568782 INE1O15225 51 aa2.27□□□□□ -2.05
UBR1-207ENST00000568782 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
UBR1-207ENST00000568782 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
UBR1-207ENST00000568782 PRM1P04553 51 aa1.72□□□□□ -2.13
UBR1-207ENST00000568782 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
UBR1-207ENST00000568782 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
UBR1-207ENST00000568782 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 69.2 ms