RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 SMIM20Q8N5G0 67 aa2.07□□□□□ -2.08
CDH13-211ENST00000568770 UBL5Q9BZL1 73 aa2.07□□□□□ -2.08
CDH13-211ENST00000568770 SPCS1Q9Y6A9 102 aa2.07□□□□□ -2.08
CDH13-211ENST00000568770 FAM240AA0A1B0GVK7 77 aa2.04□□□□□ -2.08
CDH13-211ENST00000568770 UQCRQO14949 82 aa2.04□□□□□ -2.08
CDH13-211ENST00000568770 PRO0628Q9UI54 55 aa2.04□□□□□ -2.08
CDH13-211ENST00000568770 MT1GP13640 62 aa2.03□□□□□ -2.08
CDH13-211ENST00000568770 SPANXA2-OT1Q8N9U9 137 aa2.03□□□□□ -2.08
CDH13-211ENST00000568770 MT-ATP8P03928 68 aa2.02□□□□□ -2.09
CDH13-211ENST00000568770 TMEM258P61165 79 aa2.02□□□□□ -2.09
CDH13-211ENST00000568770 ETDBQ3ZM63 59 aa2.02□□□□□ -2.09
CDH13-211ENST00000568770 H0Y9P7 68 aa2.01□□□□□ -2.09
CDH13-211ENST00000568770 V9GYY9 64 aa2.01□□□□□ -2.09
CDH13-211ENST00000568770 ATOX1O00244 68 aa2□□□□□ -2.09
CDH13-211ENST00000568770 MT1MQ8N339 61 aa2□□□□□ -2.09
CDH13-211ENST00000568770 CCDC179H3BU77 68 aa1.99□□□□□ -2.09
CDH13-211ENST00000568770 COX7CP15954 63 aa1.98□□□□□ -2.09
CDH13-211ENST00000568770 KRTAP19-5Q3LI72 72 aa1.98□□□□□ -2.09
CDH13-211ENST00000568770 LINC00643Q86TS7 51 aa1.98□□□□□ -2.09
CDH13-211ENST00000568770 ATP5EP56381 51 aaPredicted RBP1.97□□□□□ -2.09
CDH13-211ENST00000568770 HIST1H4AP62805 103 aaKnown RBP1.96□□□□□ -2.1
CDH13-211ENST00000568770 LUZP6Q538Z0 58 aa1.96□□□□□ -2.1
CDH13-211ENST00000568770 LINC00208Q96KT6 92 aa1.96□□□□□ -2.1
CDH13-211ENST00000568770 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
CDH13-211ENST00000568770 SERP2Q8N6R1 65 aa1.95□□□□□ -2.1
CDH13-211ENST00000568770 MT1LQ93083 61 aa1.95□□□□□ -2.1
CDH13-211ENST00000568770 SERP1Q9Y6X1 66 aa1.95□□□□□ -2.1
CDH13-211ENST00000568770 A0A0D9SG42 100 aa1.94□□□□□ -2.1
CDH13-211ENST00000568770 SPINT4Q6UDR6 99 aa1.94□□□□□ -2.1
CDH13-211ENST00000568770 PMAIP1Q13794 54 aa1.92□□□□□ -2.1
CDH13-211ENST00000568770 ATP5EP2Q5VTU8 51 aa1.92□□□□□ -2.1
CDH13-211ENST00000568770 DMAC1Q96GE9 116 aa1.92□□□□□ -2.1
CDH13-211ENST00000568770 MP68P56378 58 aa1.89□□□□□ -2.11
CDH13-211ENST00000568770 TRAV7A0A075B6U4 112 aa1.88□□□□□ -2.11
CDH13-211ENST00000568770 KRTAP13-4Q3LI77 160 aa1.88□□□□□ -2.11
CDH13-211ENST00000568770 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
CDH13-211ENST00000568770 PSPHP1O15172 72 aa1.87□□□□□ -2.11
CDH13-211ENST00000568770 KRTAP12-4P60329 112 aa1.86□□□□□ -2.11
CDH13-211ENST00000568770 H7BZZ5 65 aa1.85□□□□□ -2.11
CDH13-211ENST00000568770 Q1T7F1 81 aa1.85□□□□□ -2.11
CDH13-211ENST00000568770 BRK1Q8WUW1 75 aa1.85□□□□□ -2.11
CDH13-211ENST00000568770 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.11
CDH13-211ENST00000568770 KRTAP12-3P60328 96 aa1.84□□□□□ -2.11
CDH13-211ENST00000568770 KTN1-AS1Q86SY8 53 aa1.84□□□□□ -2.11
CDH13-211ENST00000568770 SPTSSBQ8NFR3 76 aa1.84□□□□□ -2.11
CDH13-211ENST00000568770 C10orf95Q9H7T3 257 aa1.84□□□□□ -2.11
CDH13-211ENST00000568770 MUC5ACP98088 5654 aa1.84□□□□□ -2.12
CDH13-211ENST00000568770 ACYP2P14621 99 aa1.83□□□□□ -2.12
CDH13-211ENST00000568770 H3BPC8 53 aa1.82□□□□□ -2.12
CDH13-211ENST00000568770 SYNE1Q8NF91 8797 aaKnown RBP1.81□□□□□ -2.12
CDH13-211ENST00000568770 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
CDH13-211ENST00000568770 CHKB-CPT1BH3BT56 60 aa1.79□□□□□ -2.12
CDH13-211ENST00000568770 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
CDH13-211ENST00000568770 KRTAP12-1P59990 96 aa1.75□□□□□ -2.13
CDH13-211ENST00000568770 SPATA8Q6RVD6 105 aa1.75□□□□□ -2.13
CDH13-211ENST00000568770 CDC42SE1Q9NRR8 79 aa1.75□□□□□ -2.13
CDH13-211ENST00000568770 KRTAP25-1Q3LHN0 102 aa1.73□□□□□ -2.13
CDH13-211ENST00000568770 TNP1P09430 55 aa1.72□□□□□ -2.13
CDH13-211ENST00000568770 SNURFQ9Y675 71 aa1.72□□□□□ -2.13
CDH13-211ENST00000568770 A0A1B0GU33 70 aa1.68□□□□□ -2.14
CDH13-211ENST00000568770 A6NED7 52 aa1.68□□□□□ -2.14
CDH13-211ENST00000568770 LINC01558Q9Y6Z2 57 aa1.68□□□□□ -2.14
CDH13-211ENST00000568770 KRTAP6-1Q3LI64 71 aa1.66□□□□□ -2.14
CDH13-211ENST00000568770 PRR15LQ9BU68 103 aa1.66□□□□□ -2.14
CDH13-211ENST00000568770 KRTAP6-2Q3LI66 62 aa1.65□□□□□ -2.15
CDH13-211ENST00000568770 MT1AP04731 61 aa1.64□□□□□ -2.15
CDH13-211ENST00000568770 COA5Q86WW8 74 aa1.61□□□□□ -2.15
CDH13-211ENST00000568770 K7ERS5 55 aa1.6□□□□□ -2.15
CDH13-211ENST00000568770 UQCR11O14957 56 aa1.6□□□□□ -2.15
CDH13-211ENST00000568770 ROMO1P60602 79 aa1.59□□□□□ -2.15
CDH13-211ENST00000568770 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
CDH13-211ENST00000568770 MIR22HGQ0VDD5 57 aa1.56□□□□□ -2.16
CDH13-211ENST00000568770 A0A1B0GU69 56 aa1.54□□□□□ -2.16
CDH13-211ENST00000568770 INE1O15225 51 aa1.32□□□□□ -2.2
CDH13-211ENST00000568770 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
CDH13-211ENST00000568770 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
CDH13-211ENST00000568770 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
CDH13-211ENST00000568770 PRM1P04553 51 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 57.5 ms