RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 KRTAP10-12P60413 245 aa3.8□□□□□ -1.8
TCF4-240ENST00000568673 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
TCF4-240ENST00000568673 KRTAP12-3P60328 96 aa3.74□□□□□ -1.81
TCF4-240ENST00000568673 USH2AO75445 5202 aa3.73□□□□□ -1.81
TCF4-240ENST00000568673 KMT2DO14686 5537 aa3.61□□□□□ -1.83
TCF4-240ENST00000568673 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
TCF4-240ENST00000568673 SSPOA2VEC9 5147 aa3.52□□□□□ -1.85
TCF4-240ENST00000568673 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
TCF4-240ENST00000568673 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
TCF4-240ENST00000568673 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
TCF4-240ENST00000568673 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
TCF4-240ENST00000568673 FSIP2Q5CZC0 6907 aa3.41□□□□□ -1.86
TCF4-240ENST00000568673 MT1EP04732 61 aa3.39□□□□□ -1.87
TCF4-240ENST00000568673 MT1LQ93083 61 aa3.37□□□□□ -1.87
TCF4-240ENST00000568673 KRTAP9-6A8MVA2 160 aa3.37□□□□□ -1.87
TCF4-240ENST00000568673 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
TCF4-240ENST00000568673 INE1O15225 51 aa3.31□□□□□ -1.88
TCF4-240ENST00000568673 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
TCF4-240ENST00000568673 FCGBPQ9Y6R7 5405 aaPredicted RBP3.28□□□□□ -1.88
TCF4-240ENST00000568673 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
TCF4-240ENST00000568673 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
TCF4-240ENST00000568673 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
TCF4-240ENST00000568673 KRTAP2-1Q9BYU5 128 aa3.23□□□□□ -1.89
TCF4-240ENST00000568673 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
TCF4-240ENST00000568673 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
TCF4-240ENST00000568673 MT1GP13640 62 aa3.19□□□□□ -1.9
TCF4-240ENST00000568673 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
TCF4-240ENST00000568673 MT1MQ8N339 61 aa3.17□□□□□ -1.9
TCF4-240ENST00000568673 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
TCF4-240ENST00000568673 SPRR2FQ96RM1 72 aa3.11□□□□□ -1.91
TCF4-240ENST00000568673 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
TCF4-240ENST00000568673 MT3P25713 68 aa3.08□□□□□ -1.92
TCF4-240ENST00000568673 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
TCF4-240ENST00000568673 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.93
TCF4-240ENST00000568673 CRCT1Q9UGL9 99 aa3.02□□□□□ -1.93
TCF4-240ENST00000568673 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
TCF4-240ENST00000568673 MDN1Q9NU22 5596 aa2.99□□□□□ -1.93
TCF4-240ENST00000568673 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
TCF4-240ENST00000568673 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
TCF4-240ENST00000568673 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
TCF4-240ENST00000568673 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
TCF4-240ENST00000568673 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
TCF4-240ENST00000568673 SPRR2EP22531 72 aa2.85□□□□□ -1.95
TCF4-240ENST00000568673 SPRR2BP35325 72 aa2.85□□□□□ -1.95
TCF4-240ENST00000568673 SPRR2AP35326 72 aa2.85□□□□□ -1.95
TCF4-240ENST00000568673 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
TCF4-240ENST00000568673 MT1AP04731 61 aa2.84□□□□□ -1.95
TCF4-240ENST00000568673 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
TCF4-240ENST00000568673 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
TCF4-240ENST00000568673 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
TCF4-240ENST00000568673 KRTAP6-3Q3LI67 103 aa2.74□□□□□ -1.97
TCF4-240ENST00000568673 SPRR2DP22532 72 aa2.73□□□□□ -1.97
TCF4-240ENST00000568673 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
TCF4-240ENST00000568673 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
TCF4-240ENST00000568673 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
TCF4-240ENST00000568673 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
TCF4-240ENST00000568673 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
TCF4-240ENST00000568673 NEBP20929 6669 aa2.54□□□□□ -2
TCF4-240ENST00000568673 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
TCF4-240ENST00000568673 PRM1P04553 51 aa2.47□□□□□ -2.01
TCF4-240ENST00000568673 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
TCF4-240ENST00000568673 MT4P47944 62 aa2.39□□□□□ -2.03
TCF4-240ENST00000568673 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
TCF4-240ENST00000568673 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
TCF4-240ENST00000568673 KRTAP20-1Q3LI63 56 aa2.31□□□□□ -2.04
TCF4-240ENST00000568673 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
TCF4-240ENST00000568673 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
TCF4-240ENST00000568673 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
TCF4-240ENST00000568673 KRTAP5-10Q6L8G5 202 aa2.02□□□□□ -2.09
TCF4-240ENST00000568673 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
TCF4-240ENST00000568673 KRTAP5-8O75690 187 aa2□□□□□ -2.09
TCF4-240ENST00000568673 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
TCF4-240ENST00000568673 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
TCF4-240ENST00000568673 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
TCF4-240ENST00000568673 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
TCF4-240ENST00000568673 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
TCF4-240ENST00000568673 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 605.5 ms