RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 MT1LQ93083 61 aa4.15□□□□□ -1.75
GTF3C1-209ENST00000568569 ANAPC13Q9BS18 74 aa4.13□□□□□ -1.75
GTF3C1-209ENST00000568569 KRTAP4-3Q9BYR4 195 aa4.13□□□□□ -1.75
GTF3C1-209ENST00000568569 CCDC179H3BU77 68 aa4.1□□□□□ -1.75
GTF3C1-209ENST00000568569 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
GTF3C1-209ENST00000568569 SPRR5A0A1B0GTR4 108 aa4.09□□□□□ -1.75
GTF3C1-209ENST00000568569 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
GTF3C1-209ENST00000568569 SPATA8Q6RVD6 105 aa3.99□□□□□ -1.77
GTF3C1-209ENST00000568569 C10orf95Q9H7T3 257 aa3.99□□□□□ -1.77
GTF3C1-209ENST00000568569 SPINT4Q6UDR6 99 aa3.98□□□□□ -1.77
GTF3C1-209ENST00000568569 SEC61GP60059 68 aa3.95□□□□□ -1.78
GTF3C1-209ENST00000568569 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
GTF3C1-209ENST00000568569 SERP1Q9Y6X1 66 aa3.94□□□□□ -1.78
GTF3C1-209ENST00000568569 A0A1B0GU33 70 aa3.93□□□□□ -1.78
GTF3C1-209ENST00000568569 ATP5EP56381 51 aaPredicted RBP3.93□□□□□ -1.78
GTF3C1-209ENST00000568569 KRTAP19-4Q3LI73 84 aa3.93□□□□□ -1.78
GTF3C1-209ENST00000568569 KRTAP12-1P59990 96 aa3.92□□□□□ -1.78
GTF3C1-209ENST00000568569 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
GTF3C1-209ENST00000568569 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
GTF3C1-209ENST00000568569 A0A1B0GU69 56 aa3.91□□□□□ -1.78
GTF3C1-209ENST00000568569 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
GTF3C1-209ENST00000568569 A8MU10 97 aa3.9□□□□□ -1.79
GTF3C1-209ENST00000568569 TMEM258P61165 79 aa3.89□□□□□ -1.79
GTF3C1-209ENST00000568569 TNP1P09430 55 aa3.86□□□□□ -1.79
GTF3C1-209ENST00000568569 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
GTF3C1-209ENST00000568569 LINC01558Q9Y6Z2 57 aa3.81□□□□□ -1.8
GTF3C1-209ENST00000568569 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
GTF3C1-209ENST00000568569 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
GTF3C1-209ENST00000568569 SMIM26A0A096LP01 95 aa3.79□□□□□ -1.8
GTF3C1-209ENST00000568569 PRR15LQ9BU68 103 aa3.78□□□□□ -1.8
GTF3C1-209ENST00000568569 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
GTF3C1-209ENST00000568569 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
GTF3C1-209ENST00000568569 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
GTF3C1-209ENST00000568569 UQCR11O14957 56 aa3.67□□□□□ -1.82
GTF3C1-209ENST00000568569 PSPHP1O15172 72 aa3.66□□□□□ -1.82
GTF3C1-209ENST00000568569 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
GTF3C1-209ENST00000568569 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
GTF3C1-209ENST00000568569 MIR22HGQ0VDD5 57 aa3.63□□□□□ -1.83
GTF3C1-209ENST00000568569 Q1T7F1 81 aa3.61□□□□□ -1.83
GTF3C1-209ENST00000568569 V9GYY9 64 aa3.57□□□□□ -1.84
GTF3C1-209ENST00000568569 KRTAP15-1Q3LI76 137 aa3.55□□□□□ -1.84
GTF3C1-209ENST00000568569 MT1AP04731 61 aa3.53□□□□□ -1.84
GTF3C1-209ENST00000568569 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.84
GTF3C1-209ENST00000568569 PRAC1Q96KF2 57 aa3.53□□□□□ -1.84
GTF3C1-209ENST00000568569 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
GTF3C1-209ENST00000568569 A6NED7 52 aa3.51□□□□□ -1.85
GTF3C1-209ENST00000568569 K7ERS5 55 aa3.46□□□□□ -1.86
GTF3C1-209ENST00000568569 KRTAP25-1Q3LHN0 102 aa3.46□□□□□ -1.86
GTF3C1-209ENST00000568569 RPS28P62857 69 aaKnown RBP3.45□□□□□ -1.86
GTF3C1-209ENST00000568569 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
GTF3C1-209ENST00000568569 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
GTF3C1-209ENST00000568569 CDC42SE1Q9NRR8 79 aa3.36□□□□□ -1.87
GTF3C1-209ENST00000568569 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
GTF3C1-209ENST00000568569 ROMO1P60602 79 aa3.32□□□□□ -1.88
GTF3C1-209ENST00000568569 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
GTF3C1-209ENST00000568569 MT3P25713 68 aa3.25□□□□□ -1.89
GTF3C1-209ENST00000568569 BRK1Q8WUW1 75 aa3.13□□□□□ -1.91
GTF3C1-209ENST00000568569 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
GTF3C1-209ENST00000568569 NDUFAF8A1L188 74 aa3.04□□□□□ -1.92
GTF3C1-209ENST00000568569 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
GTF3C1-209ENST00000568569 PRO0628Q9UI54 55 aa2.91□□□□□ -1.94
GTF3C1-209ENST00000568569 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
GTF3C1-209ENST00000568569 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
GTF3C1-209ENST00000568569 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
GTF3C1-209ENST00000568569 LUZP6Q538Z0 58 aa2.72□□□□□ -1.97
GTF3C1-209ENST00000568569 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
GTF3C1-209ENST00000568569 KTN1-AS1Q86SY8 53 aa2.65□□□□□ -1.99
GTF3C1-209ENST00000568569 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
GTF3C1-209ENST00000568569 PHGR1C9JFL3 82 aa2.57□□□□□ -2
GTF3C1-209ENST00000568569 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
GTF3C1-209ENST00000568569 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
GTF3C1-209ENST00000568569 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
GTF3C1-209ENST00000568569 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
GTF3C1-209ENST00000568569 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
GTF3C1-209ENST00000568569 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
GTF3C1-209ENST00000568569 INE1O15225 51 aa1.86□□□□□ -2.11
GTF3C1-209ENST00000568569 PRM1P04553 51 aa1.75□□□□□ -2.13
GTF3C1-209ENST00000568569 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 69.1 ms