RNA–Protein interactions for RNA: ENST00000568468.5

GINS3-210, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-210ENST00000568468 FCGBPQ9Y6R7 5405 aaPredicted RBP2.54□□□□□ -2
GINS3-210ENST00000568468 MT1XP80297 61 aa2.54□□□□□ -2
GINS3-210ENST00000568468 CAMK2N1Q7Z7J9 78 aa2.54□□□□□ -2
GINS3-210ENST00000568468 BRK1Q8WUW1 75 aa2.53□□□□□ -2
GINS3-210ENST00000568468 CDC42SE1Q9NRR8 79 aa2.53□□□□□ -2
GINS3-210ENST00000568468 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
GINS3-210ENST00000568468 K7ERS5 55 aa2.48□□□□□ -2.01
GINS3-210ENST00000568468 NDUFAF8A1L188 74 aa2.47□□□□□ -2.01
GINS3-210ENST00000568468 LCE3CQ5T5A8 94 aa2.47□□□□□ -2.01
GINS3-210ENST00000568468 PRO2289Q9P1D8 64 aa2.47□□□□□ -2.01
GINS3-210ENST00000568468 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.02
GINS3-210ENST00000568468 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
GINS3-210ENST00000568468 MACF1Q9UPN3 7388 aaKnown RBP2.45□□□□□ -2.02
GINS3-210ENST00000568468 KRTAP6-3Q3LI67 103 aa2.43□□□□□ -2.02
GINS3-210ENST00000568468 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
GINS3-210ENST00000568468 ROMO1P60602 79 aa2.39□□□□□ -2.03
GINS3-210ENST00000568468 TNP1P09430 55 aa2.37□□□□□ -2.03
GINS3-210ENST00000568468 KRTAP4-3Q9BYR4 195 aa2.37□□□□□ -2.03
GINS3-210ENST00000568468 PRO0628Q9UI54 55 aa2.37□□□□□ -2.03
GINS3-210ENST00000568468 PMAIP1Q13794 54 aa2.36□□□□□ -2.03
GINS3-210ENST00000568468 SYNE2Q8WXH0 6885 aaKnown RBP2.36□□□□□ -2.03
GINS3-210ENST00000568468 LCE3AQ5TA76 89 aa2.34□□□□□ -2.03
GINS3-210ENST00000568468 KRTAP25-1Q3LHN0 102 aa2.33□□□□□ -2.04
GINS3-210ENST00000568468 KRTAP8-1Q8IUC2 63 aa2.32□□□□□ -2.04
GINS3-210ENST00000568468 KMT2DO14686 5537 aa2.31□□□□□ -2.04
GINS3-210ENST00000568468 KRTAP19-5Q3LI72 72 aa2.28□□□□□ -2.04
GINS3-210ENST00000568468 SPRR2FQ96RM1 72 aa2.28□□□□□ -2.04
GINS3-210ENST00000568468 KRTAP19-7Q3SYF9 63 aa2.25□□□□□ -2.05
GINS3-210ENST00000568468 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
GINS3-210ENST00000568468 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
GINS3-210ENST00000568468 MT1EP04732 61 aa2.23□□□□□ -2.05
GINS3-210ENST00000568468 SPRR2EP22531 72 aa2.23□□□□□ -2.05
GINS3-210ENST00000568468 SPRR2BP35325 72 aa2.23□□□□□ -2.05
GINS3-210ENST00000568468 SPRR2AP35326 72 aa2.23□□□□□ -2.05
GINS3-210ENST00000568468 NEBP20929 6669 aa2.23□□□□□ -2.05
GINS3-210ENST00000568468 KRTAP12-3P60328 96 aa2.22□□□□□ -2.05
GINS3-210ENST00000568468 KTN1-AS1Q86SY8 53 aa2.22□□□□□ -2.05
GINS3-210ENST00000568468 KRTAP20-1Q3LI63 56 aa2.21□□□□□ -2.06
GINS3-210ENST00000568468 PP632Q6XCG6 107 aa2.2□□□□□ -2.06
GINS3-210ENST00000568468 MDN1Q9NU22 5596 aa2.19□□□□□ -2.06
GINS3-210ENST00000568468 KRTAP2-3P0C7H8 128 aa2.17□□□□□ -2.06
GINS3-210ENST00000568468 MT1LQ93083 61 aa2.17□□□□□ -2.06
GINS3-210ENST00000568468 KRTAP2-4Q9BYR9 128 aa2.17□□□□□ -2.06
GINS3-210ENST00000568468 SPRR2DP22532 72 aa2.16□□□□□ -2.06
GINS3-210ENST00000568468 KRTAP19-3Q7Z4W3 81 aa2.15□□□□□ -2.07
GINS3-210ENST00000568468 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
GINS3-210ENST00000568468 MT1MQ8N339 61 aa2.11□□□□□ -2.07
GINS3-210ENST00000568468 KRTAP2-1Q9BYU5 128 aa2.1□□□□□ -2.07
GINS3-210ENST00000568468 MT1GP13640 62 aa2.09□□□□□ -2.07
GINS3-210ENST00000568468 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
GINS3-210ENST00000568468 DSTQ03001 7570 aaKnown RBP1.97□□□□□ -2.09
GINS3-210ENST00000568468 SPRR5A0A1B0GTR4 108 aa1.93□□□□□ -2.1
GINS3-210ENST00000568468 MT4P47944 62 aa1.87□□□□□ -2.11
GINS3-210ENST00000568468 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
GINS3-210ENST00000568468 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
GINS3-210ENST00000568468 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
GINS3-210ENST00000568468 KRTAP6-1Q3LI64 71 aa1.84□□□□□ -2.11
GINS3-210ENST00000568468 MT1AP04731 61 aa1.83□□□□□ -2.12
GINS3-210ENST00000568468 LCE3DQ9BYE3 92 aa1.82□□□□□ -2.12
GINS3-210ENST00000568468 LUZP6Q538Z0 58 aa1.81□□□□□ -2.12
GINS3-210ENST00000568468 KRTAP20-2Q3LI61 65 aa1.8□□□□□ -2.12
GINS3-210ENST00000568468 KRTAP12-4P60329 112 aa1.78□□□□□ -2.12
GINS3-210ENST00000568468 SYNE1Q8NF91 8797 aaKnown RBP1.78□□□□□ -2.12
GINS3-210ENST00000568468 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
GINS3-210ENST00000568468 KRTAP6-2Q3LI66 62 aa1.71□□□□□ -2.14
GINS3-210ENST00000568468 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
GINS3-210ENST00000568468 GPR98Q8WXG9 6306 aa1.68□□□□□ -2.14
GINS3-210ENST00000568468 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
GINS3-210ENST00000568468 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
GINS3-210ENST00000568468 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
GINS3-210ENST00000568468 MUC5BQ9HC84 5762 aaPredicted RBP1.37□□□□□ -2.19
GINS3-210ENST00000568468 INE1O15225 51 aa1.36□□□□□ -2.19
GINS3-210ENST00000568468 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
GINS3-210ENST00000568468 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
GINS3-210ENST00000568468 PRM1P04553 51 aa1.26□□□□□ -2.21
GINS3-210ENST00000568468 PHGR1C9JFL3 82 aa1.05□□□□□ -2.24
GINS3-210ENST00000568468 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
GINS3-210ENST00000568468 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 81.6 ms