RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
SMPD3-211ENST00000568373 MT1LQ93083 61 aa6.39□□□□□ -1.39
SMPD3-211ENST00000568373 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
SMPD3-211ENST00000568373 MUC12Q9UKN1 5478 aa6.25□□□□□ -1.41
SMPD3-211ENST00000568373 KRTAP9-6A8MVA2 160 aa6.23□□□□□ -1.41
SMPD3-211ENST00000568373 INE1O15225 51 aa6.22□□□□□ -1.41
SMPD3-211ENST00000568373 MDN1Q9NU22 5596 aa6.17□□□□□ -1.42
SMPD3-211ENST00000568373 SPRR2FQ96RM1 72 aa6.14□□□□□ -1.43
SMPD3-211ENST00000568373 KRTAP19-3Q7Z4W3 81 aa6.13□□□□□ -1.43
SMPD3-211ENST00000568373 KRTAP9-7A8MTY7 169 aa6.13□□□□□ -1.43
SMPD3-211ENST00000568373 MT1GP13640 62 aa6.1□□□□□ -1.43
SMPD3-211ENST00000568373 KRTAP6-3Q3LI67 103 aa6.1□□□□□ -1.43
SMPD3-211ENST00000568373 KRTAP5-9P26371 169 aa6.09□□□□□ -1.43
SMPD3-211ENST00000568373 MT1MQ8N339 61 aa6.06□□□□□ -1.44
SMPD3-211ENST00000568373 KRTAP4-3Q9BYR4 195 aa6.01□□□□□ -1.45
SMPD3-211ENST00000568373 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
SMPD3-211ENST00000568373 LOC100996750A0A140TA64 210 aa5.89□□□□□ -1.47
SMPD3-211ENST00000568373 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
SMPD3-211ENST00000568373 LCE1AQ5T7P2 110 aa5.89□□□□□ -1.47
SMPD3-211ENST00000568373 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
SMPD3-211ENST00000568373 KRTAP2-1Q9BYU5 128 aa5.89□□□□□ -1.47
SMPD3-211ENST00000568373 SPRR2EP22531 72 aa5.87□□□□□ -1.47
SMPD3-211ENST00000568373 SPRR2BP35325 72 aa5.87□□□□□ -1.47
SMPD3-211ENST00000568373 SPRR2AP35326 72 aa5.87□□□□□ -1.47
SMPD3-211ENST00000568373 NEBP20929 6669 aa5.86□□□□□ -1.47
SMPD3-211ENST00000568373 DSTQ03001 7570 aaKnown RBP5.79□□□□□ -1.48
SMPD3-211ENST00000568373 SPRR2DP22532 72 aa5.65□□□□□ -1.51
SMPD3-211ENST00000568373 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
SMPD3-211ENST00000568373 KRTAP5-5Q701N2 237 aaPredicted RBP5.43□□□□□ -1.54
SMPD3-211ENST00000568373 MT1AP04731 61 aa5.41□□□□□ -1.54
SMPD3-211ENST00000568373 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
SMPD3-211ENST00000568373 KRTAP20-1Q3LI63 56 aa5.37□□□□□ -1.55
SMPD3-211ENST00000568373 KRTAP2-2Q9BYT5 123 aa5.25□□□□□ -1.57
SMPD3-211ENST00000568373 SYNE1Q8NF91 8797 aaKnown RBP5.19□□□□□ -1.58
SMPD3-211ENST00000568373 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
SMPD3-211ENST00000568373 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
SMPD3-211ENST00000568373 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
SMPD3-211ENST00000568373 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
SMPD3-211ENST00000568373 MT4P47944 62 aa4.98□□□□□ -1.61
SMPD3-211ENST00000568373 LCE3DQ9BYE3 92 aa4.96□□□□□ -1.61
SMPD3-211ENST00000568373 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
SMPD3-211ENST00000568373 LCE4AQ5TA78 99 aa4.93□□□□□ -1.62
SMPD3-211ENST00000568373 HMCN1Q96RW7 5635 aa4.93□□□□□ -1.62
SMPD3-211ENST00000568373 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
SMPD3-211ENST00000568373 KRTAP6-2Q3LI66 62 aa4.91□□□□□ -1.62
SMPD3-211ENST00000568373 MT3P25713 68 aa4.88□□□□□ -1.63
SMPD3-211ENST00000568373 LCE3EQ5T5B0 92 aa4.87□□□□□ -1.63
SMPD3-211ENST00000568373 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
SMPD3-211ENST00000568373 OBSCNQ5VST9 7968 aa4.61□□□□□ -1.67
SMPD3-211ENST00000568373 KRTAP5-2Q701N4 177 aa4.6□□□□□ -1.67
SMPD3-211ENST00000568373 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
SMPD3-211ENST00000568373 AHNAK2Q8IVF2 5795 aa4.46□□□□□ -1.69
SMPD3-211ENST00000568373 PRM1P04553 51 aa4.44□□□□□ -1.7
SMPD3-211ENST00000568373 GPR98Q8WXG9 6306 aa4.26□□□□□ -1.73
SMPD3-211ENST00000568373 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
SMPD3-211ENST00000568373 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
SMPD3-211ENST00000568373 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
SMPD3-211ENST00000568373 KRTAP5-8O75690 187 aa4.03□□□□□ -1.76
SMPD3-211ENST00000568373 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
SMPD3-211ENST00000568373 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
SMPD3-211ENST00000568373 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
SMPD3-211ENST00000568373 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
SMPD3-211ENST00000568373 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
SMPD3-211ENST00000568373 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
SMPD3-211ENST00000568373 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.82
SMPD3-211ENST00000568373 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
SMPD3-211ENST00000568373 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.83
SMPD3-211ENST00000568373 KRTAP21-2Q3LI59 83 aa3.52□□□□□ -1.85
SMPD3-211ENST00000568373 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
SMPD3-211ENST00000568373 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
SMPD3-211ENST00000568373 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
SMPD3-211ENST00000568373 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
SMPD3-211ENST00000568373 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
SMPD3-211ENST00000568373 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
SMPD3-211ENST00000568373 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
SMPD3-211ENST00000568373 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
SMPD3-211ENST00000568373 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 87.4 ms