RNA–Protein interactions for RNA: ENST00000568329.5

CSK-211, Transcript of C-terminal Src kinase, human

TSL 5

Gene CSK, Length 1,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-211	ENST00000568329	MUC12	Q9UKN1	5478 aa		5.49	□□□□□ -1.53
CSK-211	ENST00000568329	MT1L	Q93083	61 aa		5.49	□□□□□ -1.53
CSK-211	ENST00000568329	LCE1A	Q5T7P2	110 aa		5.46	□□□□□ -1.53
CSK-211	ENST00000568329	KRTAP19-3	Q7Z4W3	81 aa		5.45	□□□□□ -1.54
CSK-211	ENST00000568329	SPRR2E	P22531	72 aa		5.44	□□□□□ -1.54
CSK-211	ENST00000568329	SPRR2B	P35325	72 aa		5.44	□□□□□ -1.54
CSK-211	ENST00000568329	SPRR2A	P35326	72 aa		5.44	□□□□□ -1.54
CSK-211	ENST00000568329	MT1G	P13640	62 aa		5.41	□□□□□ -1.54
CSK-211	ENST00000568329	NEB	P20929	6669 aa		5.4	□□□□□ -1.54
CSK-211	ENST00000568329	MDN1	Q9NU22	5596 aa		5.39	□□□□□ -1.55
CSK-211	ENST00000568329	LCE5A	Q5TCM9	118 aa		5.38	□□□□□ -1.55
CSK-211	ENST00000568329	LCE3C	Q5T5A8	94 aa		5.38	□□□□□ -1.55
CSK-211	ENST00000568329	MT1M	Q8N339	61 aa		5.3	□□□□□ -1.56
CSK-211	ENST00000568329	SPRR5	A0A1B0GTR4	108 aa		5.29	□□□□□ -1.56
CSK-211	ENST00000568329	SPRR2D	P22532	72 aa		5.25	□□□□□ -1.57
CSK-211	ENST00000568329	KRTAP4-7	Q9BYR0	210 aa		5.23	□□□□□ -1.57
CSK-211	ENST00000568329	KRTAP20-1	Q3LI63	56 aa		5.16	□□□□□ -1.58
CSK-211	ENST00000568329	KRTAP4-3	Q9BYR4	195 aa		5.16	□□□□□ -1.58
CSK-211	ENST00000568329	LUZP6	Q538Z0	58 aa		5.13	□□□□□ -1.59
CSK-211	ENST00000568329	KRTAP2-3	P0C7H8	128 aa		5.08	□□□□□ -1.6
CSK-211	ENST00000568329	KRTAP2-4	Q9BYR9	128 aa		5.08	□□□□□ -1.6
CSK-211	ENST00000568329	LCE3B	Q5TA77	95 aa		5.07	□□□□□ -1.6
CSK-211	ENST00000568329	KRTAP9-6	A8MVA2	160 aa		5.01	□□□□□ -1.61
CSK-211	ENST00000568329	DST	Q03001	7570 aa	Known RBP	4.99	□□□□□ -1.61
CSK-211	ENST00000568329	KRTAP2-2	Q9BYT5	123 aa		4.93	□□□□□ -1.62
CSK-211	ENST00000568329	KRTAP2-1	Q9BYU5	128 aa		4.93	□□□□□ -1.62
CSK-211	ENST00000568329	LOC100996750	A0A140TA64	210 aa		4.92	□□□□□ -1.62
CSK-211	ENST00000568329	NDUFAF8	A1L188	74 aa		4.83	□□□□□ -1.64
CSK-211	ENST00000568329	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.82	□□□□□ -1.64
CSK-211	ENST00000568329	KRTAP5-4	Q6L8H1	288 aa		4.72	□□□□□ -1.65
CSK-211	ENST00000568329	MT1A	P04731	61 aa		4.7	□□□□□ -1.66
CSK-211	ENST00000568329	LCE4A	Q5TA78	99 aa		4.68	□□□□□ -1.66
CSK-211	ENST00000568329	KRTAP6-1	Q3LI64	71 aa		4.59	□□□□□ -1.67
CSK-211	ENST00000568329	MT4	P47944	62 aa		4.55	□□□□□ -1.68
CSK-211	ENST00000568329	KRTAP4-9	Q9BYQ8	210 aa		4.55	□□□□□ -1.68
CSK-211	ENST00000568329	KRTAP12-4	P60329	112 aa		4.53	□□□□□ -1.69
CSK-211	ENST00000568329	LCE1D	Q5T752	114 aa		4.53	□□□□□ -1.69
CSK-211	ENST00000568329	KRTAP4-6	Q9BYQ5	205 aa		4.49	□□□□□ -1.69
CSK-211	ENST00000568329	SYNE1	Q8NF91	8797 aa	Known RBP	4.46	□□□□□ -1.69
CSK-211	ENST00000568329	KRTAP9-4	Q9BYQ2	154 aa		4.45	□□□□□ -1.7
CSK-211	ENST00000568329	HMCN1	Q96RW7	5635 aa		4.41	□□□□□ -1.7
CSK-211	ENST00000568329	KRTAP20-2	Q3LI61	65 aa		4.4	□□□□□ -1.7
CSK-211	ENST00000568329		A0A0A0MQY5	61 aa		4.31	□□□□□ -1.72
CSK-211	ENST00000568329	MT3	P25713	68 aa		4.27	□□□□□ -1.73
CSK-211	ENST00000568329	KRTAP6-2	Q3LI66	62 aa		4.27	□□□□□ -1.73
CSK-211	ENST00000568329	KRTAP5-3	Q6L8H2	238 aa		4.27	□□□□□ -1.73
CSK-211	ENST00000568329	KRTAP5-2	Q701N4	177 aa		4.25	□□□□□ -1.73
CSK-211	ENST00000568329	GPR98	Q8WXG9	6306 aa		4.22	□□□□□ -1.73
CSK-211	ENST00000568329	AHNAK2	Q8IVF2	5795 aa		4.17	□□□□□ -1.74
CSK-211	ENST00000568329	INE1	O15225	51 aa		4.07	□□□□□ -1.76
CSK-211	ENST00000568329	LCE3D	Q9BYE3	92 aa		4.04	□□□□□ -1.76
CSK-211	ENST00000568329		H3BS24	57 aa		4.02	□□□□□ -1.77
CSK-211	ENST00000568329	KRTAP5-10	Q6L8G5	202 aa		4.02	□□□□□ -1.77
CSK-211	ENST00000568329	LCE3E	Q5T5B0	92 aa		3.92	□□□□□ -1.78
CSK-211	ENST00000568329	KRTAP4-11	Q9BYQ6	195 aa		3.87	□□□□□ -1.79
CSK-211	ENST00000568329	KRTAP5-7	Q6L8G8	165 aa		3.84	□□□□□ -1.8
CSK-211	ENST00000568329	OBSCN	Q5VST9	7968 aa		3.79	□□□□□ -1.8
CSK-211	ENST00000568329	LCE1E	Q5T753	118 aa		3.76	□□□□□ -1.81
CSK-211	ENST00000568329	KRTAP5-8	O75690	187 aa		3.74	□□□□□ -1.81
CSK-211	ENST00000568329	KRTAP5-1	Q6L8H4	278 aa		3.69	□□□□□ -1.82
CSK-211	ENST00000568329	MUC5AC	P98088	5654 aa		3.52	□□□□□ -1.85
CSK-211	ENST00000568329	KRTAP4-2	Q9BYR5	136 aa		3.49	□□□□□ -1.85
CSK-211	ENST00000568329	LCE1C	Q5T751	118 aa		3.48	□□□□□ -1.85
CSK-211	ENST00000568329	LCE1B	Q5T7P3	118 aa		3.48	□□□□□ -1.85
CSK-211	ENST00000568329	KRTAP9-9	Q9BYP9	154 aa		3.42	□□□□□ -1.86
CSK-211	ENST00000568329	AHNAK	Q09666	5890 aa	Known RBP	3.37	□□□□□ -1.87
CSK-211	ENST00000568329	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.36	□□□□□ -1.87
CSK-211	ENST00000568329	PRM1	P04553	51 aa		3.33	□□□□□ -1.88
CSK-211	ENST00000568329	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.26	□□□□□ -1.89
CSK-211	ENST00000568329	KRTAP5-11	Q6L8G4	156 aa		3.1	□□□□□ -1.91
CSK-211	ENST00000568329	KRTAP21-2	Q3LI59	83 aa		3.03	□□□□□ -1.92
CSK-211	ENST00000568329	KRTAP4-12	Q9BQ66	201 aa		2.93	□□□□□ -1.94
CSK-211	ENST00000568329	LCE1F	Q5T754	118 aa		2.87	□□□□□ -1.95
CSK-211	ENST00000568329	KRTAP4-4	Q9BYR3	166 aa		2.66	□□□□□ -1.98
CSK-211	ENST00000568329	PHGR1	C9JFL3	82 aa		2.66	□□□□□ -1.98
CSK-211	ENST00000568329	MUC19	Q7Z5P9	8384 aa		2.3	□□□□□ -2.04
CSK-211	ENST00000568329	KRTAP21-1	Q3LI58	79 aa		2.03	□□□□□ -2.08
CSK-211	ENST00000568329	MUC16	Q8WXI7	14507 aa		1.67	□□□□□ -2.14

Retrieved 78 of 20,778 RNA–protein pairs in 127.5 ms