RNA–Protein interactions for RNA: ENST00000567910.1

ABCA3-205, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-205ENST00000567910 KRTAP20-1Q3LI63 56 aa4.02□□□□□ -1.77
ABCA3-205ENST00000567910 KRTAP19-7Q3SYF9 63 aa4.02□□□□□ -1.77
ABCA3-205ENST00000567910 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
ABCA3-205ENST00000567910 PP632Q6XCG6 107 aa4□□□□□ -1.77
ABCA3-205ENST00000567910 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
ABCA3-205ENST00000567910 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
ABCA3-205ENST00000567910 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
ABCA3-205ENST00000567910 KRTAP19-5Q3LI72 72 aa3.97□□□□□ -1.77
ABCA3-205ENST00000567910 MT1EP04732 61 aa3.96□□□□□ -1.78
ABCA3-205ENST00000567910 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
ABCA3-205ENST00000567910 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
ABCA3-205ENST00000567910 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
ABCA3-205ENST00000567910 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
ABCA3-205ENST00000567910 SPRR2DP22532 72 aa3.93□□□□□ -1.78
ABCA3-205ENST00000567910 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
ABCA3-205ENST00000567910 LCE4AQ5TA78 99 aa3.9□□□□□ -1.79
ABCA3-205ENST00000567910 LCE5AQ5TCM9 118 aa3.89□□□□□ -1.79
ABCA3-205ENST00000567910 KRTAP19-3Q7Z4W3 81 aa3.87□□□□□ -1.79
ABCA3-205ENST00000567910 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
ABCA3-205ENST00000567910 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
ABCA3-205ENST00000567910 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
ABCA3-205ENST00000567910 LCE1DQ5T752 114 aa3.81□□□□□ -1.8
ABCA3-205ENST00000567910 SVIPQ8NHG7 77 aa3.81□□□□□ -1.8
ABCA3-205ENST00000567910 KRTAP15-1Q3LI76 137 aa3.8□□□□□ -1.8
ABCA3-205ENST00000567910 MT1LQ93083 61 aa3.8□□□□□ -1.8
ABCA3-205ENST00000567910 MT1GP13640 62 aa3.76□□□□□ -1.81
ABCA3-205ENST00000567910 MT1MQ8N339 61 aa3.75□□□□□ -1.81
ABCA3-205ENST00000567910 KRTAP4-7Q9BYR0 210 aa3.74□□□□□ -1.81
ABCA3-205ENST00000567910 KRTAP4-3Q9BYR4 195 aa3.7□□□□□ -1.82
ABCA3-205ENST00000567910 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
ABCA3-205ENST00000567910 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
ABCA3-205ENST00000567910 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
ABCA3-205ENST00000567910 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
ABCA3-205ENST00000567910 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
ABCA3-205ENST00000567910 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
ABCA3-205ENST00000567910 KRTAP5-5Q701N2 237 aaPredicted RBP3.47□□□□□ -1.85
ABCA3-205ENST00000567910 MT4P47944 62 aa3.46□□□□□ -1.86
ABCA3-205ENST00000567910 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
ABCA3-205ENST00000567910 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
ABCA3-205ENST00000567910 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.87
ABCA3-205ENST00000567910 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
ABCA3-205ENST00000567910 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.87
ABCA3-205ENST00000567910 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
ABCA3-205ENST00000567910 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
ABCA3-205ENST00000567910 MT1AP04731 61 aa3.23□□□□□ -1.89
ABCA3-205ENST00000567910 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
ABCA3-205ENST00000567910 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
ABCA3-205ENST00000567910 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
ABCA3-205ENST00000567910 KRTAP5-10Q6L8G5 202 aa3.2□□□□□ -1.9
ABCA3-205ENST00000567910 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
ABCA3-205ENST00000567910 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
ABCA3-205ENST00000567910 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
ABCA3-205ENST00000567910 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
ABCA3-205ENST00000567910 MT3P25713 68 aa2.95□□□□□ -1.94
ABCA3-205ENST00000567910 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
ABCA3-205ENST00000567910 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
ABCA3-205ENST00000567910 A0A0A0MQY5 61 aa2.81□□□□□ -1.96
ABCA3-205ENST00000567910 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
ABCA3-205ENST00000567910 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
ABCA3-205ENST00000567910 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
ABCA3-205ENST00000567910 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
ABCA3-205ENST00000567910 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
ABCA3-205ENST00000567910 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
ABCA3-205ENST00000567910 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
ABCA3-205ENST00000567910 INE1O15225 51 aa2.51□□□□□ -2.01
ABCA3-205ENST00000567910 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
ABCA3-205ENST00000567910 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
ABCA3-205ENST00000567910 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
ABCA3-205ENST00000567910 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
ABCA3-205ENST00000567910 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
ABCA3-205ENST00000567910 PRM1P04553 51 aa2.2□□□□□ -2.06
ABCA3-205ENST00000567910 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
ABCA3-205ENST00000567910 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
ABCA3-205ENST00000567910 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
ABCA3-205ENST00000567910 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
ABCA3-205ENST00000567910 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
ABCA3-205ENST00000567910 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 6.9 ms