RNA–Protein interactions for RNA: ENST00000567722.5

CHRFAM7A-205, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best)

Gene CHRFAM7A, Length 689 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-205ENST00000567722 LCE1DQ5T752 114 aa7.18□□□□□ -1.26
CHRFAM7A-205ENST00000567722 UQCR11O14957 56 aa7.17□□□□□ -1.26
CHRFAM7A-205ENST00000567722 TMEM258P61165 79 aa7.16□□□□□ -1.26
CHRFAM7A-205ENST00000567722 MT4P47944 62 aa7.13□□□□□ -1.27
CHRFAM7A-205ENST00000567722 KRTAP4-3Q9BYR4 195 aa7.11□□□□□ -1.27
CHRFAM7A-205ENST00000567722 KRTAP12-3P60328 96 aa7.07□□□□□ -1.28
CHRFAM7A-205ENST00000567722 HMCN1Q96RW7 5635 aa7.06□□□□□ -1.28
CHRFAM7A-205ENST00000567722 LOC100996750A0A140TA64 210 aa7.04□□□□□ -1.28
CHRFAM7A-205ENST00000567722 KRTAP4-6Q9BYQ5 205 aa7.04□□□□□ -1.28
CHRFAM7A-205ENST00000567722 MIR22HGQ0VDD5 57 aa7□□□□□ -1.29
CHRFAM7A-205ENST00000567722 K7ERS5 55 aa6.97□□□□□ -1.29
CHRFAM7A-205ENST00000567722 KRTAP5-4Q6L8H1 288 aa6.97□□□□□ -1.29
CHRFAM7A-205ENST00000567722 KRTAP25-1Q3LHN0 102 aa6.94□□□□□ -1.3
CHRFAM7A-205ENST00000567722 KRTAP4-7Q9BYR0 210 aa6.92□□□□□ -1.3
CHRFAM7A-205ENST00000567722 V9GYY9 64 aa6.85□□□□□ -1.31
CHRFAM7A-205ENST00000567722 AHNAK2Q8IVF2 5795 aa6.8□□□□□ -1.32
CHRFAM7A-205ENST00000567722 PSPHP1O15172 72 aa6.8□□□□□ -1.32
CHRFAM7A-205ENST00000567722 Q1T7F1 81 aa6.71□□□□□ -1.34
CHRFAM7A-205ENST00000567722 KRTAP19-4Q3LI73 84 aa6.68□□□□□ -1.34
CHRFAM7A-205ENST00000567722 KRTAP5-10Q6L8G5 202 aa6.68□□□□□ -1.34
CHRFAM7A-205ENST00000567722 KRTAP5-5Q701N2 237 aaPredicted RBP6.66□□□□□ -1.34
CHRFAM7A-205ENST00000567722 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
CHRFAM7A-205ENST00000567722 KRTAP12-4P60329 112 aa6.62□□□□□ -1.35
CHRFAM7A-205ENST00000567722 KRTAP20-2Q3LI61 65 aa6.62□□□□□ -1.35
CHRFAM7A-205ENST00000567722 A6NED7 52 aa6.61□□□□□ -1.35
CHRFAM7A-205ENST00000567722 SPRR5A0A1B0GTR4 108 aa6.59□□□□□ -1.35
CHRFAM7A-205ENST00000567722 KRTAP15-1Q3LI76 137 aa6.58□□□□□ -1.36
CHRFAM7A-205ENST00000567722 KRTAP5-3Q6L8H2 238 aa6.54□□□□□ -1.36
CHRFAM7A-205ENST00000567722 CDC42SE1Q9NRR8 79 aa6.54□□□□□ -1.36
CHRFAM7A-205ENST00000567722 LCE3CQ5T5A8 94 aa6.49□□□□□ -1.37
CHRFAM7A-205ENST00000567722 SYNE1Q8NF91 8797 aaKnown RBP6.47□□□□□ -1.37
CHRFAM7A-205ENST00000567722 KRTAP5-7Q6L8G8 165 aa6.44□□□□□ -1.38
CHRFAM7A-205ENST00000567722 ROMO1P60602 79 aa6.39□□□□□ -1.39
CHRFAM7A-205ENST00000567722 RPS28P62857 69 aaKnown RBP6.37□□□□□ -1.39
CHRFAM7A-205ENST00000567722 PCP4P48539 62 aa6.29□□□□□ -1.4
CHRFAM7A-205ENST00000567722 KRTAP4-12Q9BQ66 201 aa6.27□□□□□ -1.41
CHRFAM7A-205ENST00000567722 MT1AP04731 61 aa6.23□□□□□ -1.41
CHRFAM7A-205ENST00000567722 KRTAP6-1Q3LI64 71 aa6.18□□□□□ -1.42
CHRFAM7A-205ENST00000567722 KRTAP5-2Q701N4 177 aa6.09□□□□□ -1.43
CHRFAM7A-205ENST00000567722 KRTAP9-9Q9BYP9 154 aa6.08□□□□□ -1.44
CHRFAM7A-205ENST00000567722 KRTAP9-4Q9BYQ2 154 aa6.08□□□□□ -1.44
CHRFAM7A-205ENST00000567722 KRTAP4-11Q9BYQ6 195 aa6.07□□□□□ -1.44
CHRFAM7A-205ENST00000567722 KRTAP9-6A8MVA2 160 aa6.05□□□□□ -1.44
CHRFAM7A-205ENST00000567722 KRTAP6-2Q3LI66 62 aa5.94□□□□□ -1.46
CHRFAM7A-205ENST00000567722 KRTAP5-8O75690 187 aa5.83□□□□□ -1.48
CHRFAM7A-205ENST00000567722 OBSCNQ5VST9 7968 aa5.79□□□□□ -1.48
CHRFAM7A-205ENST00000567722 MT3P25713 68 aa5.74□□□□□ -1.49
CHRFAM7A-205ENST00000567722 MUC5BQ9HC84 5762 aaPredicted RBP5.64□□□□□ -1.51
CHRFAM7A-205ENST00000567722 H3BS24 57 aa5.62□□□□□ -1.51
CHRFAM7A-205ENST00000567722 MUC5ACP98088 5654 aa5.62□□□□□ -1.51
CHRFAM7A-205ENST00000567722 AHNAKQ09666 5890 aaKnown RBP5.61□□□□□ -1.51
CHRFAM7A-205ENST00000567722 BRK1Q8WUW1 75 aa5.54□□□□□ -1.52
CHRFAM7A-205ENST00000567722 KRTAP4-2Q9BYR5 136 aa5.5□□□□□ -1.53
CHRFAM7A-205ENST00000567722 KRTAP5-1Q6L8H4 278 aa5.47□□□□□ -1.53
CHRFAM7A-205ENST00000567722 LCE1EQ5T753 118 aa5.25□□□□□ -1.57
CHRFAM7A-205ENST00000567722 PMAIP1Q13794 54 aa5.19□□□□□ -1.58
CHRFAM7A-205ENST00000567722 PRO0628Q9UI54 55 aa5.12□□□□□ -1.59
CHRFAM7A-205ENST00000567722 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
CHRFAM7A-205ENST00000567722 LCE1BQ5T7P3 118 aa5□□□□□ -1.61
CHRFAM7A-205ENST00000567722 PRAC1Q96KF2 57 aa5□□□□□ -1.61
CHRFAM7A-205ENST00000567722 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
CHRFAM7A-205ENST00000567722 KTN1-AS1Q86SY8 53 aa4.72□□□□□ -1.65
CHRFAM7A-205ENST00000567722 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
CHRFAM7A-205ENST00000567722 KRTAP5-11Q6L8G4 156 aa4.42□□□□□ -1.7
CHRFAM7A-205ENST00000567722 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
CHRFAM7A-205ENST00000567722 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
CHRFAM7A-205ENST00000567722 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
CHRFAM7A-205ENST00000567722 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
CHRFAM7A-205ENST00000567722 KRTAP21-2Q3LI59 83 aa4.05□□□□□ -1.76
CHRFAM7A-205ENST00000567722 PHGR1C9JFL3 82 aa3.95□□□□□ -1.78
CHRFAM7A-205ENST00000567722 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
CHRFAM7A-205ENST00000567722 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
CHRFAM7A-205ENST00000567722 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
CHRFAM7A-205ENST00000567722 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
CHRFAM7A-205ENST00000567722 PRM1P04553 51 aa3.25□□□□□ -1.89
CHRFAM7A-205ENST00000567722 INE1O15225 51 aa3.15□□□□□ -1.91
CHRFAM7A-205ENST00000567722 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
CHRFAM7A-205ENST00000567722 MUC16Q8WXI7 14507 aa2.55□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 74.4 ms