RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 A6NED7 52 aa4.51□□□□□ -1.69
RNF40-211ENST00000567365 K7ERS5 55 aa4.48□□□□□ -1.69
RNF40-211ENST00000567365 KRTAP25-1Q3LHN0 102 aa4.45□□□□□ -1.7
RNF40-211ENST00000567365 GPR98Q8WXG9 6306 aa4.45□□□□□ -1.7
RNF40-211ENST00000567365 MT1GP13640 62 aa4.44□□□□□ -1.7
RNF40-211ENST00000567365 MT1LQ93083 61 aa4.44□□□□□ -1.7
RNF40-211ENST00000567365 KRTAP4-9Q9BYQ8 210 aa4.44□□□□□ -1.7
RNF40-211ENST00000567365 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
RNF40-211ENST00000567365 MT1MQ8N339 61 aa4.38□□□□□ -1.71
RNF40-211ENST00000567365 CDC42SE1Q9NRR8 79 aa4.38□□□□□ -1.71
RNF40-211ENST00000567365 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
RNF40-211ENST00000567365 PP632Q6XCG6 107 aa4.35□□□□□ -1.71
RNF40-211ENST00000567365 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
RNF40-211ENST00000567365 ROMO1P60602 79 aa4.28□□□□□ -1.72
RNF40-211ENST00000567365 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
RNF40-211ENST00000567365 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
RNF40-211ENST00000567365 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
RNF40-211ENST00000567365 MT4P47944 62 aa4.18□□□□□ -1.74
RNF40-211ENST00000567365 KRTAP19-4Q3LI73 84 aa4.17□□□□□ -1.74
RNF40-211ENST00000567365 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.75
RNF40-211ENST00000567365 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
RNF40-211ENST00000567365 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
RNF40-211ENST00000567365 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
RNF40-211ENST00000567365 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.75
RNF40-211ENST00000567365 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
RNF40-211ENST00000567365 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
RNF40-211ENST00000567365 BRK1Q8WUW1 75 aa4.06□□□□□ -1.76
RNF40-211ENST00000567365 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
RNF40-211ENST00000567365 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
RNF40-211ENST00000567365 LOC100996750A0A140TA64 210 aa3.99□□□□□ -1.77
RNF40-211ENST00000567365 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
RNF40-211ENST00000567365 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
RNF40-211ENST00000567365 SYNE1Q8NF91 8797 aaKnown RBP3.92□□□□□ -1.78
RNF40-211ENST00000567365 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
RNF40-211ENST00000567365 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.79
RNF40-211ENST00000567365 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
RNF40-211ENST00000567365 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
RNF40-211ENST00000567365 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
RNF40-211ENST00000567365 MT1AP04731 61 aa3.78□□□□□ -1.8
RNF40-211ENST00000567365 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
RNF40-211ENST00000567365 PRO0628Q9UI54 55 aa3.72□□□□□ -1.81
RNF40-211ENST00000567365 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
RNF40-211ENST00000567365 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
RNF40-211ENST00000567365 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
RNF40-211ENST00000567365 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
RNF40-211ENST00000567365 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
RNF40-211ENST00000567365 KTN1-AS1Q86SY8 53 aa3.52□□□□□ -1.85
RNF40-211ENST00000567365 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
RNF40-211ENST00000567365 MT3P25713 68 aa3.42□□□□□ -1.86
RNF40-211ENST00000567365 SVIPQ8NHG7 77 aa3.42□□□□□ -1.86
RNF40-211ENST00000567365 MUC5ACP98088 5654 aa3.4□□□□□ -1.87
RNF40-211ENST00000567365 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
RNF40-211ENST00000567365 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
RNF40-211ENST00000567365 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
RNF40-211ENST00000567365 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
RNF40-211ENST00000567365 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
RNF40-211ENST00000567365 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
RNF40-211ENST00000567365 LUZP6Q538Z0 58 aa3□□□□□ -1.93
RNF40-211ENST00000567365 KRTAP4-2Q9BYR5 136 aa2.97□□□□□ -1.93
RNF40-211ENST00000567365 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
RNF40-211ENST00000567365 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
RNF40-211ENST00000567365 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
RNF40-211ENST00000567365 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
RNF40-211ENST00000567365 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
RNF40-211ENST00000567365 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
RNF40-211ENST00000567365 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
RNF40-211ENST00000567365 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
RNF40-211ENST00000567365 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
RNF40-211ENST00000567365 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
RNF40-211ENST00000567365 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
RNF40-211ENST00000567365 H3BS24 57 aa2.38□□□□□ -2.03
RNF40-211ENST00000567365 A0A0A0MQY5 61 aa2.33□□□□□ -2.04
RNF40-211ENST00000567365 PRM1P04553 51 aa2.2□□□□□ -2.06
RNF40-211ENST00000567365 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
RNF40-211ENST00000567365 INE1O15225 51 aa2.16□□□□□ -2.06
RNF40-211ENST00000567365 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
RNF40-211ENST00000567365 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
RNF40-211ENST00000567365 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 119.1 ms