RNA–Protein interactions for RNA: ENST00000566685.1

GGA2-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, human

TSL 4

Gene GGA2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA2-208	ENST00000566685	LCE5A	Q5TCM9	118 aa		6	□□□□□ -1.45
GGA2-208	ENST00000566685		A6NED7	52 aa		5.99	□□□□□ -1.45
GGA2-208	ENST00000566685	MT1G	P13640	62 aa		5.93	□□□□□ -1.46
GGA2-208	ENST00000566685	KRTAP25-1	Q3LHN0	102 aa		5.93	□□□□□ -1.46
GGA2-208	ENST00000566685	PP632	Q6XCG6	107 aa		5.92	□□□□□ -1.46
GGA2-208	ENST00000566685	MT1L	Q93083	61 aa		5.85	□□□□□ -1.47
GGA2-208	ENST00000566685	KRTAP12-3	P60328	96 aa		5.82	□□□□□ -1.48
GGA2-208	ENST00000566685	MT1M	Q8N339	61 aa		5.78	□□□□□ -1.48
GGA2-208	ENST00000566685	CDC42SE1	Q9NRR8	79 aa		5.77	□□□□□ -1.49
GGA2-208	ENST00000566685	KRTAP23-1	A1A580	65 aa		5.73	□□□□□ -1.49
GGA2-208	ENST00000566685	LOC100996750	A0A140TA64	210 aa		5.69	□□□□□ -1.5
GGA2-208	ENST00000566685	KRTAP4-6	Q9BYQ5	205 aa		5.69	□□□□□ -1.5
GGA2-208	ENST00000566685	DST	Q03001	7570 aa	Known RBP	5.68	□□□□□ -1.5
GGA2-208	ENST00000566685	ROMO1	P60602	79 aa		5.67	□□□□□ -1.5
GGA2-208	ENST00000566685	KRTAP19-4	Q3LI73	84 aa		5.6	□□□□□ -1.51
GGA2-208	ENST00000566685	KRTAP4-3	Q9BYR4	195 aa		5.58	□□□□□ -1.52
GGA2-208	ENST00000566685	KRTAP4-7	Q9BYR0	210 aa		5.53	□□□□□ -1.52
GGA2-208	ENST00000566685	LCE4A	Q5TA78	99 aa		5.51	□□□□□ -1.53
GGA2-208	ENST00000566685	KRTAP15-1	Q3LI76	137 aa		5.5	□□□□□ -1.53
GGA2-208	ENST00000566685	KRTAP4-9	Q9BYQ8	210 aa		5.5	□□□□□ -1.53
GGA2-208	ENST00000566685	LCE1D	Q5T752	114 aa		5.41	□□□□□ -1.54
GGA2-208	ENST00000566685	KRTAP5-4	Q6L8H1	288 aa		5.4	□□□□□ -1.54
GGA2-208	ENST00000566685	MT4	P47944	62 aa		5.39	□□□□□ -1.55
GGA2-208	ENST00000566685	LCE3C	Q5T5A8	94 aa		5.37	□□□□□ -1.55
GGA2-208	ENST00000566685	BRK1	Q8WUW1	75 aa		5.33	□□□□□ -1.56
GGA2-208	ENST00000566685	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.27	□□□□□ -1.57
GGA2-208	ENST00000566685	SVIP	Q8NHG7	77 aa		5.22	□□□□□ -1.57
GGA2-208	ENST00000566685	HMCN1	Q96RW7	5635 aa		5.2	□□□□□ -1.58
GGA2-208	ENST00000566685	KRTAP12-4	P60329	112 aa		5.18	□□□□□ -1.58
GGA2-208	ENST00000566685	SPRR5	A0A1B0GTR4	108 aa		5.13	□□□□□ -1.59
GGA2-208	ENST00000566685	KRTAP4-12	Q9BQ66	201 aa		5.13	□□□□□ -1.59
GGA2-208	ENST00000566685	KRTAP20-2	Q3LI61	65 aa		5.08	□□□□□ -1.6
GGA2-208	ENST00000566685	GPR98	Q8WXG9	6306 aa		5.06	□□□□□ -1.6
GGA2-208	ENST00000566685	PMAIP1	Q13794	54 aa		5.04	□□□□□ -1.6
GGA2-208	ENST00000566685	MT1A	P04731	61 aa		5	□□□□□ -1.61
GGA2-208	ENST00000566685	KRTAP9-6	A8MVA2	160 aa		4.98	□□□□□ -1.61
GGA2-208	ENST00000566685	KRTAP9-9	Q9BYP9	154 aa		4.98	□□□□□ -1.61
GGA2-208	ENST00000566685	KRTAP9-4	Q9BYQ2	154 aa		4.98	□□□□□ -1.61
GGA2-208	ENST00000566685		H3BS24	57 aa		4.95	□□□□□ -1.62
GGA2-208	ENST00000566685	KRTAP6-1	Q3LI64	71 aa		4.92	□□□□□ -1.62
GGA2-208	ENST00000566685	KRTAP5-10	Q6L8G5	202 aa		4.92	□□□□□ -1.62
GGA2-208	ENST00000566685	KRTAP5-3	Q6L8H2	238 aa		4.92	□□□□□ -1.62
GGA2-208	ENST00000566685	AHNAK2	Q8IVF2	5795 aa		4.9	□□□□□ -1.63
GGA2-208	ENST00000566685	SYNE1	Q8NF91	8797 aa	Known RBP	4.89	□□□□□ -1.63
GGA2-208	ENST00000566685	PRO0628	Q9UI54	55 aa		4.8	□□□□□ -1.64
GGA2-208	ENST00000566685	KRTAP5-2	Q701N4	177 aa		4.76	□□□□□ -1.65
GGA2-208	ENST00000566685	KRTAP5-7	Q6L8G8	165 aa		4.73	□□□□□ -1.65
GGA2-208	ENST00000566685	PRAC1	Q96KF2	57 aa		4.73	□□□□□ -1.65
GGA2-208	ENST00000566685	KRTAP6-2	Q3LI66	62 aa		4.69	□□□□□ -1.66
GGA2-208	ENST00000566685	KRTAP4-11	Q9BYQ6	195 aa		4.61	□□□□□ -1.67
GGA2-208	ENST00000566685	MT3	P25713	68 aa		4.6	□□□□□ -1.67
GGA2-208	ENST00000566685	KTN1-AS1	Q86SY8	53 aa		4.55	□□□□□ -1.68
GGA2-208	ENST00000566685	KRTAP4-2	Q9BYR5	136 aa		4.47	□□□□□ -1.69
GGA2-208	ENST00000566685	KRTAP5-8	O75690	187 aa		4.43	□□□□□ -1.7
GGA2-208	ENST00000566685	OBSCN	Q5VST9	7968 aa		4.3	□□□□□ -1.72
GGA2-208	ENST00000566685	KRTAP5-1	Q6L8H4	278 aa		4.22	□□□□□ -1.73
GGA2-208	ENST00000566685	LCE1E	Q5T753	118 aa		4.18	□□□□□ -1.74
GGA2-208	ENST00000566685	LUZP6	Q538Z0	58 aa		4.11	□□□□□ -1.75
GGA2-208	ENST00000566685	MUC5AC	P98088	5654 aa		4.01	□□□□□ -1.77
GGA2-208	ENST00000566685	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.98	□□□□□ -1.77
GGA2-208	ENST00000566685	AHNAK	Q09666	5890 aa	Known RBP	3.94	□□□□□ -1.78
GGA2-208	ENST00000566685		A0A0A0MQY5	61 aa		3.94	□□□□□ -1.78
GGA2-208	ENST00000566685	LCE3D	Q9BYE3	92 aa		3.94	□□□□□ -1.78
GGA2-208	ENST00000566685	LCE1B	Q5T7P3	118 aa		3.89	□□□□□ -1.79
GGA2-208	ENST00000566685	LCE1C	Q5T751	118 aa		3.86	□□□□□ -1.79
GGA2-208	ENST00000566685	LCE3E	Q5T5B0	92 aa		3.73	□□□□□ -1.81
GGA2-208	ENST00000566685	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.53	□□□□□ -1.84
GGA2-208	ENST00000566685	KRTAP5-11	Q6L8G4	156 aa		3.47	□□□□□ -1.85
GGA2-208	ENST00000566685	NDUFAF8	A1L188	74 aa		3.37	□□□□□ -1.87
GGA2-208	ENST00000566685	LCE1F	Q5T754	118 aa		3.37	□□□□□ -1.87
GGA2-208	ENST00000566685	KRTAP21-2	Q3LI59	83 aa		3.24	□□□□□ -1.89
GGA2-208	ENST00000566685	PHGR1	C9JFL3	82 aa		2.99	□□□□□ -1.93
GGA2-208	ENST00000566685	KRTAP4-4	Q9BYR3	166 aa		2.92	□□□□□ -1.94
GGA2-208	ENST00000566685	PRM1	P04553	51 aa		2.88	□□□□□ -1.95
GGA2-208	ENST00000566685	INE1	O15225	51 aa		2.8	□□□□□ -1.96
GGA2-208	ENST00000566685	MUC19	Q7Z5P9	8384 aa		2.64	□□□□□ -1.99
GGA2-208	ENST00000566685	KRTAP21-1	Q3LI58	79 aa		2.21	□□□□□ -2.06
GGA2-208	ENST00000566685	MUC16	Q8WXI7	14507 aa		1.85	□□□□□ -2.11

Retrieved 78 of 20,778 RNA–protein pairs in 114.4 ms