RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 MT1LQ93083 61 aa5.66□□□□□ -1.5
VAC14-208ENST00000566655 SPRR2FQ96RM1 72 aa5.63□□□□□ -1.51
VAC14-208ENST00000566655 KRTAP20-1Q3LI63 56 aa5.59□□□□□ -1.51
VAC14-208ENST00000566655 MDN1Q9NU22 5596 aa5.55□□□□□ -1.52
VAC14-208ENST00000566655 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
VAC14-208ENST00000566655 KRTAP19-3Q7Z4W3 81 aa5.54□□□□□ -1.52
VAC14-208ENST00000566655 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
VAC14-208ENST00000566655 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
VAC14-208ENST00000566655 H3BS24 57 aa5.5□□□□□ -1.53
VAC14-208ENST00000566655 MT1GP13640 62 aa5.47□□□□□ -1.53
VAC14-208ENST00000566655 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
VAC14-208ENST00000566655 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
VAC14-208ENST00000566655 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
VAC14-208ENST00000566655 MT1MQ8N339 61 aa5.43□□□□□ -1.54
VAC14-208ENST00000566655 KRTAP2-3P0C7H8 128 aa5.36□□□□□ -1.55
VAC14-208ENST00000566655 KRTAP2-4Q9BYR9 128 aa5.36□□□□□ -1.55
VAC14-208ENST00000566655 SPRR2EP22531 72 aa5.35□□□□□ -1.55
VAC14-208ENST00000566655 SPRR2BP35325 72 aa5.35□□□□□ -1.55
VAC14-208ENST00000566655 SPRR2AP35326 72 aa5.35□□□□□ -1.55
VAC14-208ENST00000566655 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
VAC14-208ENST00000566655 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
VAC14-208ENST00000566655 KRTAP2-2Q9BYT5 123 aa5.16□□□□□ -1.58
VAC14-208ENST00000566655 KRTAP2-1Q9BYU5 128 aa5.16□□□□□ -1.58
VAC14-208ENST00000566655 SPRR2DP22532 72 aa5.16□□□□□ -1.58
VAC14-208ENST00000566655 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
VAC14-208ENST00000566655 LUZP6Q538Z0 58 aa5.14□□□□□ -1.59
VAC14-208ENST00000566655 DSTQ03001 7570 aaKnown RBP5.13□□□□□ -1.59
VAC14-208ENST00000566655 NDUFAF8A1L188 74 aa5.05□□□□□ -1.6
VAC14-208ENST00000566655 LCE3BQ5TA77 95 aa4.96□□□□□ -1.62
VAC14-208ENST00000566655 KRTAP5-5Q701N2 237 aaPredicted RBP4.95□□□□□ -1.62
VAC14-208ENST00000566655 GPR98Q8WXG9 6306 aa4.93□□□□□ -1.62
VAC14-208ENST00000566655 A0A0A0MQY5 61 aa4.9□□□□□ -1.63
VAC14-208ENST00000566655 MT1AP04731 61 aa4.79□□□□□ -1.64
VAC14-208ENST00000566655 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
VAC14-208ENST00000566655 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
VAC14-208ENST00000566655 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
VAC14-208ENST00000566655 SYNE1Q8NF91 8797 aaKnown RBP4.68□□□□□ -1.66
VAC14-208ENST00000566655 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
VAC14-208ENST00000566655 HMCN1Q96RW7 5635 aa4.59□□□□□ -1.68
VAC14-208ENST00000566655 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
VAC14-208ENST00000566655 LCE1DQ5T752 114 aa4.54□□□□□ -1.68
VAC14-208ENST00000566655 AHNAK2Q8IVF2 5795 aa4.51□□□□□ -1.69
VAC14-208ENST00000566655 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
VAC14-208ENST00000566655 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
VAC14-208ENST00000566655 MT4P47944 62 aa4.47□□□□□ -1.69
VAC14-208ENST00000566655 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
VAC14-208ENST00000566655 KRTAP5-10Q6L8G5 202 aa4.4□□□□□ -1.71
VAC14-208ENST00000566655 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
VAC14-208ENST00000566655 MT3P25713 68 aa4.32□□□□□ -1.72
VAC14-208ENST00000566655 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
VAC14-208ENST00000566655 KRTAP5-3Q6L8H2 238 aa4.27□□□□□ -1.73
VAC14-208ENST00000566655 KRTAP5-7Q6L8G8 165 aa4.27□□□□□ -1.73
VAC14-208ENST00000566655 INE1O15225 51 aa4.16□□□□□ -1.74
VAC14-208ENST00000566655 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
VAC14-208ENST00000566655 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
VAC14-208ENST00000566655 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
VAC14-208ENST00000566655 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
VAC14-208ENST00000566655 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
VAC14-208ENST00000566655 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
VAC14-208ENST00000566655 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
VAC14-208ENST00000566655 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
VAC14-208ENST00000566655 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
VAC14-208ENST00000566655 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
VAC14-208ENST00000566655 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
VAC14-208ENST00000566655 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
VAC14-208ENST00000566655 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
VAC14-208ENST00000566655 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
VAC14-208ENST00000566655 PRM1P04553 51 aa3.48□□□□□ -1.85
VAC14-208ENST00000566655 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
VAC14-208ENST00000566655 KRTAP4-12Q9BQ66 201 aa3.17□□□□□ -1.9
VAC14-208ENST00000566655 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
VAC14-208ENST00000566655 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
VAC14-208ENST00000566655 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
VAC14-208ENST00000566655 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
VAC14-208ENST00000566655 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
VAC14-208ENST00000566655 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
VAC14-208ENST00000566655 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
VAC14-208ENST00000566655 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 89.8 ms