RNA–Protein interactions for RNA: ENST00000566540.5

PMM2-211, Transcript of phosphomannomutase 2, humanhuman

TSL 1 (best)

Gene PMM2, Length 1,557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM2-211ENST00000566540 LCE1AQ5T7P2 110 aa5.42□□□□□ -1.54
PMM2-211ENST00000566540 MT1LQ93083 61 aa5.42□□□□□ -1.54
PMM2-211ENST00000566540 KRTAP15-1Q3LI76 137 aa5.41□□□□□ -1.54
PMM2-211ENST00000566540 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
PMM2-211ENST00000566540 SPRR2EP22531 72 aa5.38□□□□□ -1.55
PMM2-211ENST00000566540 SPRR2BP35325 72 aa5.38□□□□□ -1.55
PMM2-211ENST00000566540 SPRR2AP35326 72 aa5.38□□□□□ -1.55
PMM2-211ENST00000566540 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
PMM2-211ENST00000566540 NEBP20929 6669 aa5.32□□□□□ -1.56
PMM2-211ENST00000566540 MT1GP13640 62 aa5.31□□□□□ -1.56
PMM2-211ENST00000566540 MT1MQ8N339 61 aa5.26□□□□□ -1.57
PMM2-211ENST00000566540 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
PMM2-211ENST00000566540 KRTAP19-4Q3LI73 84 aa5.23□□□□□ -1.57
PMM2-211ENST00000566540 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
PMM2-211ENST00000566540 SPRR2DP22532 72 aa5.19□□□□□ -1.58
PMM2-211ENST00000566540 KRTAP4-3Q9BYR4 195 aa5.16□□□□□ -1.58
PMM2-211ENST00000566540 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
PMM2-211ENST00000566540 SPRR5A0A1B0GTR4 108 aa4.98□□□□□ -1.61
PMM2-211ENST00000566540 KRTAP2-3P0C7H8 128 aa4.98□□□□□ -1.61
PMM2-211ENST00000566540 KRTAP2-4Q9BYR9 128 aa4.98□□□□□ -1.61
PMM2-211ENST00000566540 DSTQ03001 7570 aaKnown RBP4.97□□□□□ -1.61
PMM2-211ENST00000566540 KRTAP9-6A8MVA2 160 aa4.96□□□□□ -1.62
PMM2-211ENST00000566540 KRTAP20-1Q3LI63 56 aa4.95□□□□□ -1.62
PMM2-211ENST00000566540 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
PMM2-211ENST00000566540 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
PMM2-211ENST00000566540 KRTAP2-1Q9BYU5 128 aa4.85□□□□□ -1.63
PMM2-211ENST00000566540 KRTAP5-5Q701N2 237 aaPredicted RBP4.79□□□□□ -1.64
PMM2-211ENST00000566540 KRTAP5-4Q6L8H1 288 aa4.69□□□□□ -1.66
PMM2-211ENST00000566540 H3BS24 57 aa4.65□□□□□ -1.66
PMM2-211ENST00000566540 KRTAP4-6Q9BYQ5 205 aa4.65□□□□□ -1.67
PMM2-211ENST00000566540 MT1AP04731 61 aa4.61□□□□□ -1.67
PMM2-211ENST00000566540 LCE4AQ5TA78 99 aa4.61□□□□□ -1.67
PMM2-211ENST00000566540 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
PMM2-211ENST00000566540 LUZP6Q538Z0 58 aa4.57□□□□□ -1.68
PMM2-211ENST00000566540 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
PMM2-211ENST00000566540 MT4P47944 62 aa4.51□□□□□ -1.69
PMM2-211ENST00000566540 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
PMM2-211ENST00000566540 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
PMM2-211ENST00000566540 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
PMM2-211ENST00000566540 HMCN1Q96RW7 5635 aa4.43□□□□□ -1.7
PMM2-211ENST00000566540 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.7
PMM2-211ENST00000566540 KRTAP20-2Q3LI61 65 aa4.37□□□□□ -1.71
PMM2-211ENST00000566540 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
PMM2-211ENST00000566540 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
PMM2-211ENST00000566540 KRTAP5-3Q6L8H2 238 aa4.24□□□□□ -1.73
PMM2-211ENST00000566540 KRTAP5-2Q701N4 177 aa4.21□□□□□ -1.74
PMM2-211ENST00000566540 MT3P25713 68 aa4.17□□□□□ -1.74
PMM2-211ENST00000566540 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
PMM2-211ENST00000566540 A0A0A0MQY5 61 aa3.9□□□□□ -1.78
PMM2-211ENST00000566540 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
PMM2-211ENST00000566540 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
PMM2-211ENST00000566540 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.8
PMM2-211ENST00000566540 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.8
PMM2-211ENST00000566540 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
PMM2-211ENST00000566540 KRTAP4-12Q9BQ66 201 aa3.82□□□□□ -1.8
PMM2-211ENST00000566540 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
PMM2-211ENST00000566540 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
PMM2-211ENST00000566540 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
PMM2-211ENST00000566540 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
PMM2-211ENST00000566540 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
PMM2-211ENST00000566540 INE1O15225 51 aa3.63□□□□□ -1.83
PMM2-211ENST00000566540 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
PMM2-211ENST00000566540 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
PMM2-211ENST00000566540 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
PMM2-211ENST00000566540 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
PMM2-211ENST00000566540 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
PMM2-211ENST00000566540 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
PMM2-211ENST00000566540 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
PMM2-211ENST00000566540 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
PMM2-211ENST00000566540 PRM1P04553 51 aa3.14□□□□□ -1.91
PMM2-211ENST00000566540 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
PMM2-211ENST00000566540 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
PMM2-211ENST00000566540 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
PMM2-211ENST00000566540 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
PMM2-211ENST00000566540 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
PMM2-211ENST00000566540 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
PMM2-211ENST00000566540 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
PMM2-211ENST00000566540 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 7.5 ms