RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 KRTAP2-4Q9BYR9 128 aa7.61□□□□□ -1.19
SPSB3-208ENST00000566339 KRTAP2-1Q9BYU5 128 aa7.61□□□□□ -1.19
SPSB3-208ENST00000566339 KRTAP19-7Q3SYF9 63 aa7.58□□□□□ -1.2
SPSB3-208ENST00000566339 MUC12Q9UKN1 5478 aa7.56□□□□□ -1.2
SPSB3-208ENST00000566339 KRTAP4-8A0A0G2JLE6 195 aa7.56□□□□□ -1.2
SPSB3-208ENST00000566339 KRTAP9-6A8MVA2 160 aa7.56□□□□□ -1.2
SPSB3-208ENST00000566339 KRTAP4-8Q9BYQ9 185 aa7.56□□□□□ -1.2
SPSB3-208ENST00000566339 KMT2DO14686 5537 aa7.46□□□□□ -1.22
SPSB3-208ENST00000566339 NEBP20929 6669 aa7.44□□□□□ -1.22
SPSB3-208ENST00000566339 MT1LQ93083 61 aa7.41□□□□□ -1.22
SPSB3-208ENST00000566339 MT1EP04732 61 aa7.38□□□□□ -1.23
SPSB3-208ENST00000566339 MDN1Q9NU22 5596 aa7.35□□□□□ -1.23
SPSB3-208ENST00000566339 KRTAP5-9P26371 169 aa7.29□□□□□ -1.24
SPSB3-208ENST00000566339 KRTAP4-7Q9BYR0 210 aa7.26□□□□□ -1.25
SPSB3-208ENST00000566339 SPRR2FQ96RM1 72 aa7.15□□□□□ -1.27
SPSB3-208ENST00000566339 KRTAP20-1Q3LI63 56 aa7.05□□□□□ -1.28
SPSB3-208ENST00000566339 SPRR2EP22531 72 aa7.01□□□□□ -1.29
SPSB3-208ENST00000566339 SPRR2BP35325 72 aa7.01□□□□□ -1.29
SPSB3-208ENST00000566339 SPRR2AP35326 72 aa7.01□□□□□ -1.29
SPSB3-208ENST00000566339 MT1GP13640 62 aa6.93□□□□□ -1.3
SPSB3-208ENST00000566339 LCE1AQ5T7P2 110 aa6.91□□□□□ -1.3
SPSB3-208ENST00000566339 KRTAP19-3Q7Z4W3 81 aa6.87□□□□□ -1.31
SPSB3-208ENST00000566339 MT1MQ8N339 61 aa6.87□□□□□ -1.31
SPSB3-208ENST00000566339 SPRR2DP22532 72 aa6.77□□□□□ -1.33
SPSB3-208ENST00000566339 KRTAP4-3Q9BYR4 195 aa6.77□□□□□ -1.33
SPSB3-208ENST00000566339 LOC100996750A0A140TA64 210 aa6.76□□□□□ -1.33
SPSB3-208ENST00000566339 KRTAP2-2Q9BYT5 123 aa6.67□□□□□ -1.34
SPSB3-208ENST00000566339 KRTAP12-4P60329 112 aa6.64□□□□□ -1.35
SPSB3-208ENST00000566339 LCE5AQ5TCM9 118 aa6.64□□□□□ -1.35
SPSB3-208ENST00000566339 LCE3BQ5TA77 95 aa6.59□□□□□ -1.35
SPSB3-208ENST00000566339 DSTQ03001 7570 aaKnown RBP6.54□□□□□ -1.36
SPSB3-208ENST00000566339 MT1AP04731 61 aa6.52□□□□□ -1.37
SPSB3-208ENST00000566339 KRTAP6-1Q3LI64 71 aa6.21□□□□□ -1.42
SPSB3-208ENST00000566339 LCE3DQ9BYE3 92 aa6.19□□□□□ -1.42
SPSB3-208ENST00000566339 LCE3EQ5T5B0 92 aa6.18□□□□□ -1.42
SPSB3-208ENST00000566339 KRTAP4-9Q9BYQ8 210 aa6.16□□□□□ -1.42
SPSB3-208ENST00000566339 KRTAP5-5Q701N2 237 aaPredicted RBP6.12□□□□□ -1.43
SPSB3-208ENST00000566339 HMCN1Q96RW7 5635 aa5.99□□□□□ -1.45
SPSB3-208ENST00000566339 LCE1DQ5T752 114 aa5.98□□□□□ -1.45
SPSB3-208ENST00000566339 GPR98Q8WXG9 6306 aa5.98□□□□□ -1.45
SPSB3-208ENST00000566339 MT4P47944 62 aa5.95□□□□□ -1.46
SPSB3-208ENST00000566339 LCE4AQ5TA78 99 aa5.95□□□□□ -1.46
SPSB3-208ENST00000566339 SYNE1Q8NF91 8797 aaKnown RBP5.9□□□□□ -1.46
SPSB3-208ENST00000566339 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
SPSB3-208ENST00000566339 PRM1P04553 51 aa5.88□□□□□ -1.47
SPSB3-208ENST00000566339 KRTAP5-4Q6L8H1 288 aa5.85□□□□□ -1.47
SPSB3-208ENST00000566339 KRTAP4-6Q9BYQ5 205 aa5.79□□□□□ -1.48
SPSB3-208ENST00000566339 AHNAK2Q8IVF2 5795 aa5.73□□□□□ -1.49
SPSB3-208ENST00000566339 KRTAP6-2Q3LI66 62 aa5.67□□□□□ -1.5
SPSB3-208ENST00000566339 MT3P25713 68 aa5.66□□□□□ -1.5
SPSB3-208ENST00000566339 KRTAP20-2Q3LI61 65 aa5.55□□□□□ -1.52
SPSB3-208ENST00000566339 KRTAP5-10Q6L8G5 202 aa5.5□□□□□ -1.53
SPSB3-208ENST00000566339 KRTAP5-3Q6L8H2 238 aa5.41□□□□□ -1.54
SPSB3-208ENST00000566339 KRTAP5-7Q6L8G8 165 aa5.27□□□□□ -1.57
SPSB3-208ENST00000566339 KRTAP5-2Q701N4 177 aa5.14□□□□□ -1.59
SPSB3-208ENST00000566339 OBSCNQ5VST9 7968 aa5.06□□□□□ -1.6
SPSB3-208ENST00000566339 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
SPSB3-208ENST00000566339 KRTAP5-8O75690 187 aa4.88□□□□□ -1.63
SPSB3-208ENST00000566339 MUC5BQ9HC84 5762 aaPredicted RBP4.75□□□□□ -1.65
SPSB3-208ENST00000566339 AHNAKQ09666 5890 aaKnown RBP4.69□□□□□ -1.66
SPSB3-208ENST00000566339 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
SPSB3-208ENST00000566339 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
SPSB3-208ENST00000566339 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
SPSB3-208ENST00000566339 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
SPSB3-208ENST00000566339 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
SPSB3-208ENST00000566339 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
SPSB3-208ENST00000566339 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
SPSB3-208ENST00000566339 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
SPSB3-208ENST00000566339 KRTAP21-2Q3LI59 83 aa4.05□□□□□ -1.76
SPSB3-208ENST00000566339 KRTAP21-1Q3LI58 79 aa3.86□□□□□ -1.79
SPSB3-208ENST00000566339 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
SPSB3-208ENST00000566339 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
SPSB3-208ENST00000566339 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
SPSB3-208ENST00000566339 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
SPSB3-208ENST00000566339 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
SPSB3-208ENST00000566339 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
SPSB3-208ENST00000566339 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 108 ms