RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 KRTAP10-7P60409 375 aaPredicted RBP4.32□□□□□ -1.72
UBFD1-205ENST00000566136 FCGBPQ9Y6R7 5405 aaPredicted RBP4.31□□□□□ -1.72
UBFD1-205ENST00000566136 SPRR2GQ9BYE4 73 aa4.23□□□□□ -1.73
UBFD1-205ENST00000566136 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
UBFD1-205ENST00000566136 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
UBFD1-205ENST00000566136 KRTAP4-6Q9BYQ5 205 aa4.18□□□□□ -1.74
UBFD1-205ENST00000566136 TNP1P09430 55 aa4.18□□□□□ -1.74
UBFD1-205ENST00000566136 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.74
UBFD1-205ENST00000566136 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
UBFD1-205ENST00000566136 KRTAP19-8Q3LI54 63 aa4.06□□□□□ -1.76
UBFD1-205ENST00000566136 MT1BP07438 61 aa4.05□□□□□ -1.76
UBFD1-205ENST00000566136 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
UBFD1-205ENST00000566136 LCE3AQ5TA76 89 aa4.01□□□□□ -1.77
UBFD1-205ENST00000566136 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
UBFD1-205ENST00000566136 MT1XP80297 61 aa3.99□□□□□ -1.77
UBFD1-205ENST00000566136 NEBP20929 6669 aa3.9□□□□□ -1.78
UBFD1-205ENST00000566136 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.79
UBFD1-205ENST00000566136 KRTAP8-1Q8IUC2 63 aa3.86□□□□□ -1.79
UBFD1-205ENST00000566136 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
UBFD1-205ENST00000566136 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
UBFD1-205ENST00000566136 KMT2DO14686 5537 aa3.8□□□□□ -1.8
UBFD1-205ENST00000566136 MDN1Q9NU22 5596 aa3.79□□□□□ -1.8
UBFD1-205ENST00000566136 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
UBFD1-205ENST00000566136 KRTAP4-8A0A0G2JLE6 195 aa3.76□□□□□ -1.81
UBFD1-205ENST00000566136 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
UBFD1-205ENST00000566136 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
UBFD1-205ENST00000566136 KRTAP4-9Q9BYQ8 210 aa3.68□□□□□ -1.82
UBFD1-205ENST00000566136 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
UBFD1-205ENST00000566136 SPRR2EP22531 72 aa3.63□□□□□ -1.83
UBFD1-205ENST00000566136 SPRR2BP35325 72 aa3.63□□□□□ -1.83
UBFD1-205ENST00000566136 SPRR2AP35326 72 aa3.63□□□□□ -1.83
UBFD1-205ENST00000566136 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
UBFD1-205ENST00000566136 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
UBFD1-205ENST00000566136 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
UBFD1-205ENST00000566136 SPRR2DP22532 72 aa3.5□□□□□ -1.85
UBFD1-205ENST00000566136 KRTAP4-7Q9BYR0 210 aa3.5□□□□□ -1.85
UBFD1-205ENST00000566136 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
UBFD1-205ENST00000566136 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
UBFD1-205ENST00000566136 MT1EP04732 61 aa3.46□□□□□ -1.86
UBFD1-205ENST00000566136 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
UBFD1-205ENST00000566136 MT1LQ93083 61 aa3.45□□□□□ -1.86
UBFD1-205ENST00000566136 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
UBFD1-205ENST00000566136 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
UBFD1-205ENST00000566136 KRTAP19-3Q7Z4W3 81 aa3.26□□□□□ -1.89
UBFD1-205ENST00000566136 MT1MQ8N339 61 aa3.24□□□□□ -1.89
UBFD1-205ENST00000566136 MT1GP13640 62 aa3.24□□□□□ -1.89
UBFD1-205ENST00000566136 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
UBFD1-205ENST00000566136 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
UBFD1-205ENST00000566136 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
UBFD1-205ENST00000566136 MT4P47944 62 aa3.09□□□□□ -1.91
UBFD1-205ENST00000566136 KRTAP5-3Q6L8H2 238 aa3.07□□□□□ -1.92
UBFD1-205ENST00000566136 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
UBFD1-205ENST00000566136 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
UBFD1-205ENST00000566136 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
UBFD1-205ENST00000566136 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
UBFD1-205ENST00000566136 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
UBFD1-205ENST00000566136 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
UBFD1-205ENST00000566136 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.95
UBFD1-205ENST00000566136 MT1AP04731 61 aa2.88□□□□□ -1.95
UBFD1-205ENST00000566136 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
UBFD1-205ENST00000566136 KRTAP20-2Q3LI61 65 aa2.86□□□□□ -1.95
UBFD1-205ENST00000566136 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
UBFD1-205ENST00000566136 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
UBFD1-205ENST00000566136 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
UBFD1-205ENST00000566136 PRM1P04553 51 aa2.65□□□□□ -1.98
UBFD1-205ENST00000566136 KRTAP6-2Q3LI66 62 aa2.65□□□□□ -1.98
UBFD1-205ENST00000566136 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
UBFD1-205ENST00000566136 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
UBFD1-205ENST00000566136 KRTAP5-8O75690 187 aa2.54□□□□□ -2
UBFD1-205ENST00000566136 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
UBFD1-205ENST00000566136 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
UBFD1-205ENST00000566136 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
UBFD1-205ENST00000566136 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
UBFD1-205ENST00000566136 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
UBFD1-205ENST00000566136 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
UBFD1-205ENST00000566136 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
UBFD1-205ENST00000566136 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
UBFD1-205ENST00000566136 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 33.4 ms