RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 UQCR11O14957 56 aa5.47□□□□□ -1.53
CMTM3-212ENST00000566121 KRTAP9-9Q9BYP9 154 aa5.46□□□□□ -1.54
CMTM3-212ENST00000566121 KRTAP9-4Q9BYQ2 154 aa5.46□□□□□ -1.54
CMTM3-212ENST00000566121 A6NED7 52 aa5.43□□□□□ -1.54
CMTM3-212ENST00000566121 KRTAP4-9Q9BYQ8 210 aa5.42□□□□□ -1.54
CMTM3-212ENST00000566121 HMCN1Q96RW7 5635 aa5.42□□□□□ -1.54
CMTM3-212ENST00000566121 LCE4AQ5TA78 99 aa5.4□□□□□ -1.54
CMTM3-212ENST00000566121 MT1LQ93083 61 aa5.4□□□□□ -1.54
CMTM3-212ENST00000566121 MT1MQ8N339 61 aa5.39□□□□□ -1.55
CMTM3-212ENST00000566121 MIR22HGQ0VDD5 57 aa5.38□□□□□ -1.55
CMTM3-212ENST00000566121 H3BS24 57 aa5.36□□□□□ -1.55
CMTM3-212ENST00000566121 LCE1DQ5T752 114 aa5.35□□□□□ -1.55
CMTM3-212ENST00000566121 TNP1P09430 55 aa5.34□□□□□ -1.55
CMTM3-212ENST00000566121 CDC42SE1Q9NRR8 79 aa5.33□□□□□ -1.56
CMTM3-212ENST00000566121 C10orf95Q9H7T3 257 aa5.31□□□□□ -1.56
CMTM3-212ENST00000566121 A8MU10 97 aa5.3□□□□□ -1.56
CMTM3-212ENST00000566121 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
CMTM3-212ENST00000566121 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
CMTM3-212ENST00000566121 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
CMTM3-212ENST00000566121 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
CMTM3-212ENST00000566121 AHNAK2Q8IVF2 5795 aa5.22□□□□□ -1.57
CMTM3-212ENST00000566121 MT4P47944 62 aa5.2□□□□□ -1.58
CMTM3-212ENST00000566121 K7ERS5 55 aa5.19□□□□□ -1.58
CMTM3-212ENST00000566121 KRTAP4-3Q9BYR4 195 aa5.17□□□□□ -1.58
CMTM3-212ENST00000566121 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
CMTM3-212ENST00000566121 PRO0628Q9UI54 55 aa5.13□□□□□ -1.59
CMTM3-212ENST00000566121 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
CMTM3-212ENST00000566121 KRTAP5-10Q6L8G5 202 aa5.09□□□□□ -1.59
CMTM3-212ENST00000566121 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
CMTM3-212ENST00000566121 KRTAP4-2Q9BYR5 136 aa5.03□□□□□ -1.6
CMTM3-212ENST00000566121 KRTAP25-1Q3LHN0 102 aa5.02□□□□□ -1.61
CMTM3-212ENST00000566121 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
CMTM3-212ENST00000566121 PMAIP1Q13794 54 aa4.99□□□□□ -1.61
CMTM3-212ENST00000566121 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
CMTM3-212ENST00000566121 ROMO1P60602 79 aa4.94□□□□□ -1.62
CMTM3-212ENST00000566121 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
CMTM3-212ENST00000566121 KRTAP5-7Q6L8G8 165 aa4.94□□□□□ -1.62
CMTM3-212ENST00000566121 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
CMTM3-212ENST00000566121 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
CMTM3-212ENST00000566121 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
CMTM3-212ENST00000566121 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.64
CMTM3-212ENST00000566121 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
CMTM3-212ENST00000566121 KTN1-AS1Q86SY8 53 aa4.76□□□□□ -1.65
CMTM3-212ENST00000566121 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
CMTM3-212ENST00000566121 PRAC1Q96KF2 57 aa4.65□□□□□ -1.67
CMTM3-212ENST00000566121 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
CMTM3-212ENST00000566121 MT1AP04731 61 aa4.6□□□□□ -1.67
CMTM3-212ENST00000566121 KRTAP6-1Q3LI64 71 aa4.54□□□□□ -1.68
CMTM3-212ENST00000566121 SVIPQ8NHG7 77 aa4.47□□□□□ -1.69
CMTM3-212ENST00000566121 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
CMTM3-212ENST00000566121 MUC5BQ9HC84 5762 aaPredicted RBP4.41□□□□□ -1.7
CMTM3-212ENST00000566121 KRTAP5-8O75690 187 aa4.41□□□□□ -1.7
CMTM3-212ENST00000566121 AHNAKQ09666 5890 aaKnown RBP4.38□□□□□ -1.71
CMTM3-212ENST00000566121 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
CMTM3-212ENST00000566121 MUC5ACP98088 5654 aa4.31□□□□□ -1.72
CMTM3-212ENST00000566121 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
CMTM3-212ENST00000566121 MT3P25713 68 aa4.24□□□□□ -1.73
CMTM3-212ENST00000566121 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
CMTM3-212ENST00000566121 LCE1EQ5T753 118 aa4□□□□□ -1.77
CMTM3-212ENST00000566121 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
CMTM3-212ENST00000566121 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
CMTM3-212ENST00000566121 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
CMTM3-212ENST00000566121 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
CMTM3-212ENST00000566121 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
CMTM3-212ENST00000566121 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
CMTM3-212ENST00000566121 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
CMTM3-212ENST00000566121 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
CMTM3-212ENST00000566121 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
CMTM3-212ENST00000566121 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
CMTM3-212ENST00000566121 INE1O15225 51 aa3.06□□□□□ -1.92
CMTM3-212ENST00000566121 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
CMTM3-212ENST00000566121 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
CMTM3-212ENST00000566121 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
CMTM3-212ENST00000566121 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
CMTM3-212ENST00000566121 PRM1P04553 51 aa2.54□□□□□ -2
CMTM3-212ENST00000566121 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
CMTM3-212ENST00000566121 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 69.5 ms