RNA–Protein interactions for RNA: ENST00000565891.1

SPG7-212, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-212ENST00000565891 MT4P47944 62 aa5.26□□□□□ -1.57
SPG7-212ENST00000565891 Q1T7F1 81 aa5.26□□□□□ -1.57
SPG7-212ENST00000565891 HMCN1Q96RW7 5635 aa5.26□□□□□ -1.57
SPG7-212ENST00000565891 A0A1B0GU69 56 aa5.24□□□□□ -1.57
SPG7-212ENST00000565891 AHNAK2Q8IVF2 5795 aa5.21□□□□□ -1.58
SPG7-212ENST00000565891 A8MU10 97 aa5.2□□□□□ -1.58
SPG7-212ENST00000565891 TNP1P09430 55 aa5.2□□□□□ -1.58
SPG7-212ENST00000565891 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
SPG7-212ENST00000565891 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
SPG7-212ENST00000565891 BRK1Q8WUW1 75 aa5.19□□□□□ -1.58
SPG7-212ENST00000565891 PMAIP1Q13794 54 aa5.17□□□□□ -1.58
SPG7-212ENST00000565891 KRTAP4-3Q9BYR4 195 aa5.17□□□□□ -1.58
SPG7-212ENST00000565891 LINC01558Q9Y6Z2 57 aa5.16□□□□□ -1.58
SPG7-212ENST00000565891 KRTAP5-4Q6L8H1 288 aa5.15□□□□□ -1.59
SPG7-212ENST00000565891 PSPHP1O15172 72 aa5.12□□□□□ -1.59
SPG7-212ENST00000565891 PRR15LQ9BU68 103 aa5.11□□□□□ -1.59
SPG7-212ENST00000565891 KRTAP5-10Q6L8G5 202 aa5.1□□□□□ -1.59
SPG7-212ENST00000565891 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
SPG7-212ENST00000565891 KRTAP12-3P60328 96 aa5.02□□□□□ -1.61
SPG7-212ENST00000565891 A6NED7 52 aa5□□□□□ -1.61
SPG7-212ENST00000565891 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
SPG7-212ENST00000565891 KTN1-AS1Q86SY8 53 aa4.99□□□□□ -1.61
SPG7-212ENST00000565891 KRTAP5-7Q6L8G8 165 aa4.95□□□□□ -1.62
SPG7-212ENST00000565891 CDC42SE1Q9NRR8 79 aa4.94□□□□□ -1.62
SPG7-212ENST00000565891 KRTAP5-3Q6L8H2 238 aa4.89□□□□□ -1.63
SPG7-212ENST00000565891 UQCR11O14957 56 aa4.87□□□□□ -1.63
SPG7-212ENST00000565891 KRTAP20-2Q3LI61 65 aa4.87□□□□□ -1.63
SPG7-212ENST00000565891 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
SPG7-212ENST00000565891 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
SPG7-212ENST00000565891 KRTAP12-4P60329 112 aa4.83□□□□□ -1.64
SPG7-212ENST00000565891 MIR22HGQ0VDD5 57 aa4.83□□□□□ -1.64
SPG7-212ENST00000565891 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
SPG7-212ENST00000565891 LOC100996750A0A140TA64 210 aa4.75□□□□□ -1.65
SPG7-212ENST00000565891 KRTAP19-4Q3LI73 84 aa4.75□□□□□ -1.65
SPG7-212ENST00000565891 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
SPG7-212ENST00000565891 K7ERS5 55 aa4.71□□□□□ -1.66
SPG7-212ENST00000565891 H3BS24 57 aa4.66□□□□□ -1.66
SPG7-212ENST00000565891 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
SPG7-212ENST00000565891 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
SPG7-212ENST00000565891 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
SPG7-212ENST00000565891 PRAC1Q96KF2 57 aa4.52□□□□□ -1.69
SPG7-212ENST00000565891 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
SPG7-212ENST00000565891 MT1AP04731 61 aa4.49□□□□□ -1.69
SPG7-212ENST00000565891 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
SPG7-212ENST00000565891 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
SPG7-212ENST00000565891 AHNAKQ09666 5890 aaKnown RBP4.45□□□□□ -1.7
SPG7-212ENST00000565891 ROMO1P60602 79 aa4.43□□□□□ -1.7
SPG7-212ENST00000565891 MUC5BQ9HC84 5762 aaPredicted RBP4.39□□□□□ -1.71
SPG7-212ENST00000565891 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
SPG7-212ENST00000565891 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
SPG7-212ENST00000565891 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
SPG7-212ENST00000565891 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
SPG7-212ENST00000565891 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
SPG7-212ENST00000565891 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
SPG7-212ENST00000565891 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
SPG7-212ENST00000565891 MT3P25713 68 aa4.14□□□□□ -1.75
SPG7-212ENST00000565891 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
SPG7-212ENST00000565891 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
SPG7-212ENST00000565891 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
SPG7-212ENST00000565891 LUZP6Q538Z0 58 aa3.84□□□□□ -1.79
SPG7-212ENST00000565891 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
SPG7-212ENST00000565891 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
SPG7-212ENST00000565891 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
SPG7-212ENST00000565891 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
SPG7-212ENST00000565891 INE1O15225 51 aa3.39□□□□□ -1.87
SPG7-212ENST00000565891 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
SPG7-212ENST00000565891 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
SPG7-212ENST00000565891 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
SPG7-212ENST00000565891 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
SPG7-212ENST00000565891 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
SPG7-212ENST00000565891 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
SPG7-212ENST00000565891 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
SPG7-212ENST00000565891 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
SPG7-212ENST00000565891 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
SPG7-212ENST00000565891 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
SPG7-212ENST00000565891 PRM1P04553 51 aa2.32□□□□□ -2.04
SPG7-212ENST00000565891 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
SPG7-212ENST00000565891 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 128 ms