RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 CCDC179H3BU77 68 aa3.86□□□□□ -1.79
CNOT1-208ENST00000565697 SMIM26A0A096LP01 95 aa3.85□□□□□ -1.79
CNOT1-208ENST00000565697 PRR15LQ9BU68 103 aa3.83□□□□□ -1.8
CNOT1-208ENST00000565697 MT3P25713 68 aa3.82□□□□□ -1.8
CNOT1-208ENST00000565697 SPRR2DP22532 72 aa3.81□□□□□ -1.8
CNOT1-208ENST00000565697 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
CNOT1-208ENST00000565697 KRTAP12-1P59990 96 aa3.8□□□□□ -1.8
CNOT1-208ENST00000565697 TMEM258P61165 79 aa3.77□□□□□ -1.81
CNOT1-208ENST00000565697 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
CNOT1-208ENST00000565697 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
CNOT1-208ENST00000565697 LINC01558Q9Y6Z2 57 aa3.76□□□□□ -1.81
CNOT1-208ENST00000565697 A8MU10 97 aa3.74□□□□□ -1.81
CNOT1-208ENST00000565697 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
CNOT1-208ENST00000565697 UQCR11O14957 56 aa3.68□□□□□ -1.82
CNOT1-208ENST00000565697 MT1EP04732 61 aa3.68□□□□□ -1.82
CNOT1-208ENST00000565697 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
CNOT1-208ENST00000565697 TNP1P09430 55 aa3.67□□□□□ -1.82
CNOT1-208ENST00000565697 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
CNOT1-208ENST00000565697 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
CNOT1-208ENST00000565697 KRTAP19-5Q3LI72 72 aa3.63□□□□□ -1.83
CNOT1-208ENST00000565697 V9GYY9 64 aa3.61□□□□□ -1.83
CNOT1-208ENST00000565697 MT1GP13640 62 aa3.59□□□□□ -1.83
CNOT1-208ENST00000565697 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
CNOT1-208ENST00000565697 MIR22HGQ0VDD5 57 aa3.58□□□□□ -1.84
CNOT1-208ENST00000565697 K7ERS5 55 aa3.57□□□□□ -1.84
CNOT1-208ENST00000565697 LCE3AQ5TA76 89 aa3.57□□□□□ -1.84
CNOT1-208ENST00000565697 Q1T7F1 81 aa3.54□□□□□ -1.84
CNOT1-208ENST00000565697 MT1LQ93083 61 aa3.53□□□□□ -1.84
CNOT1-208ENST00000565697 PSPHP1O15172 72 aa3.51□□□□□ -1.85
CNOT1-208ENST00000565697 MT1MQ8N339 61 aa3.5□□□□□ -1.85
CNOT1-208ENST00000565697 KRTAP25-1Q3LHN0 102 aa3.49□□□□□ -1.85
CNOT1-208ENST00000565697 DSTQ03001 7570 aaKnown RBP3.49□□□□□ -1.85
CNOT1-208ENST00000565697 KRTAP12-3P60328 96 aa3.46□□□□□ -1.86
CNOT1-208ENST00000565697 A6NED7 52 aa3.42□□□□□ -1.86
CNOT1-208ENST00000565697 RPS28P62857 69 aaKnown RBP3.4□□□□□ -1.87
CNOT1-208ENST00000565697 PCP4P48539 62 aa3.36□□□□□ -1.87
CNOT1-208ENST00000565697 CDC42SE1Q9NRR8 79 aa3.35□□□□□ -1.87
CNOT1-208ENST00000565697 MT4P47944 62 aa3.31□□□□□ -1.88
CNOT1-208ENST00000565697 ROMO1P60602 79 aa3.28□□□□□ -1.88
CNOT1-208ENST00000565697 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
CNOT1-208ENST00000565697 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
CNOT1-208ENST00000565697 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
CNOT1-208ENST00000565697 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
CNOT1-208ENST00000565697 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
CNOT1-208ENST00000565697 KRTAP12-4P60329 112 aa3.15□□□□□ -1.91
CNOT1-208ENST00000565697 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
CNOT1-208ENST00000565697 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
CNOT1-208ENST00000565697 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
CNOT1-208ENST00000565697 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
CNOT1-208ENST00000565697 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
CNOT1-208ENST00000565697 MT1AP04731 61 aa3.02□□□□□ -1.93
CNOT1-208ENST00000565697 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
CNOT1-208ENST00000565697 BRK1Q8WUW1 75 aa2.97□□□□□ -1.93
CNOT1-208ENST00000565697 KRTAP6-1Q3LI64 71 aa2.96□□□□□ -1.94
CNOT1-208ENST00000565697 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
CNOT1-208ENST00000565697 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
CNOT1-208ENST00000565697 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
CNOT1-208ENST00000565697 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
CNOT1-208ENST00000565697 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
CNOT1-208ENST00000565697 PMAIP1Q13794 54 aa2.81□□□□□ -1.96
CNOT1-208ENST00000565697 SVIPQ8NHG7 77 aa2.81□□□□□ -1.96
CNOT1-208ENST00000565697 PRAC1Q96KF2 57 aa2.65□□□□□ -1.99
CNOT1-208ENST00000565697 PRO0628Q9UI54 55 aa2.62□□□□□ -1.99
CNOT1-208ENST00000565697 KTN1-AS1Q86SY8 53 aa2.51□□□□□ -2.01
CNOT1-208ENST00000565697 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
CNOT1-208ENST00000565697 MUC5ACP98088 5654 aa2.46□□□□□ -2.01
CNOT1-208ENST00000565697 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
CNOT1-208ENST00000565697 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
CNOT1-208ENST00000565697 LUZP6Q538Z0 58 aa2.33□□□□□ -2.04
CNOT1-208ENST00000565697 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
CNOT1-208ENST00000565697 NDUFAF8A1L188 74 aa2.16□□□□□ -2.06
CNOT1-208ENST00000565697 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
CNOT1-208ENST00000565697 A0A0A0MQY5 61 aa2.12□□□□□ -2.07
CNOT1-208ENST00000565697 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
CNOT1-208ENST00000565697 PRM1P04553 51 aa1.66□□□□□ -2.14
CNOT1-208ENST00000565697 INE1O15225 51 aa1.52□□□□□ -2.17
CNOT1-208ENST00000565697 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
CNOT1-208ENST00000565697 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms