RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 PCP4P48539 62 aa6.67□□□□□ -1.34
CMTM3-210ENST00000565666 MT1LQ93083 61 aa6.67□□□□□ -1.34
CMTM3-210ENST00000565666 A6NED7 52 aa6.64□□□□□ -1.35
CMTM3-210ENST00000565666 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
CMTM3-210ENST00000565666 MT1MQ8N339 61 aa6.61□□□□□ -1.35
CMTM3-210ENST00000565666 RPS28P62857 69 aaKnown RBP6.58□□□□□ -1.36
CMTM3-210ENST00000565666 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
CMTM3-210ENST00000565666 DSTQ03001 7570 aaKnown RBP6.53□□□□□ -1.36
CMTM3-210ENST00000565666 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
CMTM3-210ENST00000565666 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
CMTM3-210ENST00000565666 KRTAP4-9Q9BYQ8 210 aa6.38□□□□□ -1.39
CMTM3-210ENST00000565666 KRTAP4-7Q9BYR0 210 aa6.36□□□□□ -1.39
CMTM3-210ENST00000565666 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
CMTM3-210ENST00000565666 ROMO1P60602 79 aa6.3□□□□□ -1.4
CMTM3-210ENST00000565666 LCE4AQ5TA78 99 aa6.3□□□□□ -1.4
CMTM3-210ENST00000565666 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
CMTM3-210ENST00000565666 MT4P47944 62 aa6.22□□□□□ -1.41
CMTM3-210ENST00000565666 GPR98Q8WXG9 6306 aa6.2□□□□□ -1.42
CMTM3-210ENST00000565666 KRTAP19-4Q3LI73 84 aa6.19□□□□□ -1.42
CMTM3-210ENST00000565666 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
CMTM3-210ENST00000565666 KRTAP5-4Q6L8H1 288 aa6.17□□□□□ -1.42
CMTM3-210ENST00000565666 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
CMTM3-210ENST00000565666 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
CMTM3-210ENST00000565666 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
CMTM3-210ENST00000565666 KRTAP5-5Q701N2 237 aaPredicted RBP6.01□□□□□ -1.45
CMTM3-210ENST00000565666 SVIPQ8NHG7 77 aa6□□□□□ -1.45
CMTM3-210ENST00000565666 HMCN1Q96RW7 5635 aa6□□□□□ -1.45
CMTM3-210ENST00000565666 KRTAP12-4P60329 112 aa5.87□□□□□ -1.47
CMTM3-210ENST00000565666 BRK1Q8WUW1 75 aa5.87□□□□□ -1.47
CMTM3-210ENST00000565666 KRTAP20-2Q3LI61 65 aa5.84□□□□□ -1.47
CMTM3-210ENST00000565666 SPRR5A0A1B0GTR4 108 aa5.83□□□□□ -1.48
CMTM3-210ENST00000565666 AHNAK2Q8IVF2 5795 aa5.72□□□□□ -1.49
CMTM3-210ENST00000565666 SYNE1Q8NF91 8797 aaKnown RBP5.7□□□□□ -1.5
CMTM3-210ENST00000565666 KRTAP5-10Q6L8G5 202 aa5.7□□□□□ -1.5
CMTM3-210ENST00000565666 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
CMTM3-210ENST00000565666 MT1AP04731 61 aa5.68□□□□□ -1.5
CMTM3-210ENST00000565666 KRTAP6-1Q3LI64 71 aa5.64□□□□□ -1.51
CMTM3-210ENST00000565666 KRTAP5-3Q6L8H2 238 aa5.64□□□□□ -1.51
CMTM3-210ENST00000565666 PMAIP1Q13794 54 aa5.51□□□□□ -1.53
CMTM3-210ENST00000565666 KRTAP9-4Q9BYQ2 154 aa5.47□□□□□ -1.53
CMTM3-210ENST00000565666 KRTAP5-7Q6L8G8 165 aa5.45□□□□□ -1.54
CMTM3-210ENST00000565666 KRTAP5-2Q701N4 177 aa5.44□□□□□ -1.54
CMTM3-210ENST00000565666 H3BS24 57 aa5.36□□□□□ -1.55
CMTM3-210ENST00000565666 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
CMTM3-210ENST00000565666 KRTAP4-11Q9BYQ6 195 aa5.29□□□□□ -1.56
CMTM3-210ENST00000565666 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
CMTM3-210ENST00000565666 MT3P25713 68 aa5.2□□□□□ -1.58
CMTM3-210ENST00000565666 PRO0628Q9UI54 55 aa5.18□□□□□ -1.58
CMTM3-210ENST00000565666 KRTAP5-8O75690 187 aa5.1□□□□□ -1.59
CMTM3-210ENST00000565666 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
CMTM3-210ENST00000565666 KTN1-AS1Q86SY8 53 aa4.95□□□□□ -1.62
CMTM3-210ENST00000565666 KRTAP5-1Q6L8H4 278 aa4.85□□□□□ -1.63
CMTM3-210ENST00000565666 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
CMTM3-210ENST00000565666 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
CMTM3-210ENST00000565666 AHNAKQ09666 5890 aaKnown RBP4.72□□□□□ -1.65
CMTM3-210ENST00000565666 LCE1EQ5T753 118 aa4.71□□□□□ -1.66
CMTM3-210ENST00000565666 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
CMTM3-210ENST00000565666 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
CMTM3-210ENST00000565666 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
CMTM3-210ENST00000565666 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
CMTM3-210ENST00000565666 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
CMTM3-210ENST00000565666 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
CMTM3-210ENST00000565666 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
CMTM3-210ENST00000565666 LCE1CQ5T751 118 aa4.37□□□□□ -1.71
CMTM3-210ENST00000565666 LCE3EQ5T5B0 92 aa4.18□□□□□ -1.74
CMTM3-210ENST00000565666 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
CMTM3-210ENST00000565666 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
CMTM3-210ENST00000565666 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
CMTM3-210ENST00000565666 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
CMTM3-210ENST00000565666 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
CMTM3-210ENST00000565666 PHGR1C9JFL3 82 aa3.4□□□□□ -1.87
CMTM3-210ENST00000565666 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
CMTM3-210ENST00000565666 PRM1P04553 51 aa3.23□□□□□ -1.89
CMTM3-210ENST00000565666 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
CMTM3-210ENST00000565666 INE1O15225 51 aa3□□□□□ -1.93
CMTM3-210ENST00000565666 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
CMTM3-210ENST00000565666 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 100.8 ms