RNA–Protein interactions for RNA: ENST00000565034.1

NIP7-206, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-206ENST00000565034 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
NIP7-206ENST00000565034 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.08□□□□□ -1.6
NIP7-206ENST00000565034 MT1GP13640 62 aa5.08□□□□□ -1.6
NIP7-206ENST00000565034 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
NIP7-206ENST00000565034 LCE5AQ5TCM9 118 aa5.01□□□□□ -1.61
NIP7-206ENST00000565034 MT1MQ8N339 61 aa5.01□□□□□ -1.61
NIP7-206ENST00000565034 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
NIP7-206ENST00000565034 NDUFAF8A1L188 74 aa4.99□□□□□ -1.61
NIP7-206ENST00000565034 SYNE2Q8WXH0 6885 aaKnown RBP4.95□□□□□ -1.62
NIP7-206ENST00000565034 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
NIP7-206ENST00000565034 MUC12Q9UKN1 5478 aa4.92□□□□□ -1.62
NIP7-206ENST00000565034 SPRR2EP22531 72 aa4.91□□□□□ -1.62
NIP7-206ENST00000565034 SPRR2BP35325 72 aa4.91□□□□□ -1.62
NIP7-206ENST00000565034 SPRR2AP35326 72 aa4.91□□□□□ -1.62
NIP7-206ENST00000565034 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
NIP7-206ENST00000565034 KRTAP4-3Q9BYR4 195 aa4.86□□□□□ -1.63
NIP7-206ENST00000565034 KRTAP9-7A8MTY7 169 aa4.85□□□□□ -1.63
NIP7-206ENST00000565034 SPRR2DP22532 72 aa4.73□□□□□ -1.65
NIP7-206ENST00000565034 MDN1Q9NU22 5596 aa4.7□□□□□ -1.66
NIP7-206ENST00000565034 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
NIP7-206ENST00000565034 NEBP20929 6669 aa4.6□□□□□ -1.67
NIP7-206ENST00000565034 H3BS24 57 aa4.59□□□□□ -1.67
NIP7-206ENST00000565034 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
NIP7-206ENST00000565034 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
NIP7-206ENST00000565034 KRTAP2-1Q9BYU5 128 aa4.56□□□□□ -1.68
NIP7-206ENST00000565034 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
NIP7-206ENST00000565034 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
NIP7-206ENST00000565034 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
NIP7-206ENST00000565034 MT1AP04731 61 aa4.46□□□□□ -1.7
NIP7-206ENST00000565034 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
NIP7-206ENST00000565034 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
NIP7-206ENST00000565034 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
NIP7-206ENST00000565034 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
NIP7-206ENST00000565034 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
NIP7-206ENST00000565034 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
NIP7-206ENST00000565034 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
NIP7-206ENST00000565034 INE1O15225 51 aa4.2□□□□□ -1.74
NIP7-206ENST00000565034 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
NIP7-206ENST00000565034 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
NIP7-206ENST00000565034 MT4P47944 62 aa4.06□□□□□ -1.76
NIP7-206ENST00000565034 MT3P25713 68 aa4.05□□□□□ -1.76
NIP7-206ENST00000565034 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
NIP7-206ENST00000565034 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
NIP7-206ENST00000565034 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
NIP7-206ENST00000565034 LCE1DQ5T752 114 aa4□□□□□ -1.77
NIP7-206ENST00000565034 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
NIP7-206ENST00000565034 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
NIP7-206ENST00000565034 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
NIP7-206ENST00000565034 GPR98Q8WXG9 6306 aa3.86□□□□□ -1.79
NIP7-206ENST00000565034 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
NIP7-206ENST00000565034 HMCN1Q96RW7 5635 aa3.84□□□□□ -1.79
NIP7-206ENST00000565034 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
NIP7-206ENST00000565034 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
NIP7-206ENST00000565034 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
NIP7-206ENST00000565034 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
NIP7-206ENST00000565034 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
NIP7-206ENST00000565034 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
NIP7-206ENST00000565034 PRM1P04553 51 aa3.32□□□□□ -1.88
NIP7-206ENST00000565034 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
NIP7-206ENST00000565034 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
NIP7-206ENST00000565034 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
NIP7-206ENST00000565034 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
NIP7-206ENST00000565034 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
NIP7-206ENST00000565034 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
NIP7-206ENST00000565034 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
NIP7-206ENST00000565034 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
NIP7-206ENST00000565034 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
NIP7-206ENST00000565034 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
NIP7-206ENST00000565034 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
NIP7-206ENST00000565034 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
NIP7-206ENST00000565034 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
NIP7-206ENST00000565034 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
NIP7-206ENST00000565034 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
NIP7-206ENST00000565034 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
NIP7-206ENST00000565034 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
NIP7-206ENST00000565034 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
NIP7-206ENST00000565034 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
NIP7-206ENST00000565034 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 83.5 ms