RNA–Protein interactions for RNA: ENST00000564662.1

COTL1-204, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 2

Gene COTL1, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-204ENST00000564662 MT1MQ8N339 61 aa7.17□□□□□ -1.26
COTL1-204ENST00000564662 KRTAP12-1P59990 96 aa7.14□□□□□ -1.27
COTL1-204ENST00000564662 HMCN1Q96RW7 5635 aa7.12□□□□□ -1.27
COTL1-204ENST00000564662 A0A1B0GU69 56 aa7.12□□□□□ -1.27
COTL1-204ENST00000564662 A0A1B0GU33 70 aa7.11□□□□□ -1.27
COTL1-204ENST00000564662 MT1LQ93083 61 aa7.11□□□□□ -1.27
COTL1-204ENST00000564662 PRR15LQ9BU68 103 aa7.04□□□□□ -1.28
COTL1-204ENST00000564662 KRTAP4-3Q9BYR4 195 aa7.04□□□□□ -1.28
COTL1-204ENST00000564662 AHNAK2Q8IVF2 5795 aa7.02□□□□□ -1.29
COTL1-204ENST00000564662 C10orf95Q9H7T3 257 aa7□□□□□ -1.29
COTL1-204ENST00000564662 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
COTL1-204ENST00000564662 KRTAP5-4Q6L8H1 288 aa6.98□□□□□ -1.29
COTL1-204ENST00000564662 KTN1-AS1Q86SY8 53 aa6.98□□□□□ -1.29
COTL1-204ENST00000564662 PSPHP1O15172 72 aa6.97□□□□□ -1.29
COTL1-204ENST00000564662 LINC01558Q9Y6Z2 57 aa6.97□□□□□ -1.29
COTL1-204ENST00000564662 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
COTL1-204ENST00000564662 KRTAP5-10Q6L8G5 202 aa6.92□□□□□ -1.3
COTL1-204ENST00000564662 A8MU10 97 aa6.91□□□□□ -1.3
COTL1-204ENST00000564662 CDC42SE1Q9NRR8 79 aa6.91□□□□□ -1.3
COTL1-204ENST00000564662 TNP1P09430 55 aa6.89□□□□□ -1.31
COTL1-204ENST00000564662 A6NED7 52 aa6.8□□□□□ -1.32
COTL1-204ENST00000564662 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
COTL1-204ENST00000564662 UQCR11O14957 56 aa6.77□□□□□ -1.33
COTL1-204ENST00000564662 KRTAP12-3P60328 96 aa6.69□□□□□ -1.34
COTL1-204ENST00000564662 KRTAP5-3Q6L8H2 238 aa6.69□□□□□ -1.34
COTL1-204ENST00000564662 KRTAP5-7Q6L8G8 165 aa6.68□□□□□ -1.34
COTL1-204ENST00000564662 MIR22HGQ0VDD5 57 aa6.66□□□□□ -1.34
COTL1-204ENST00000564662 KRTAP20-2Q3LI61 65 aa6.64□□□□□ -1.35
COTL1-204ENST00000564662 KRTAP5-5Q701N2 237 aaPredicted RBP6.58□□□□□ -1.36
COTL1-204ENST00000564662 SPRR5A0A1B0GTR4 108 aa6.54□□□□□ -1.36
COTL1-204ENST00000564662 K7ERS5 55 aa6.52□□□□□ -1.37
COTL1-204ENST00000564662 KRTAP12-4P60329 112 aa6.48□□□□□ -1.37
COTL1-204ENST00000564662 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
COTL1-204ENST00000564662 SYNE1Q8NF91 8797 aaKnown RBP6.36□□□□□ -1.39
COTL1-204ENST00000564662 PRAC1Q96KF2 57 aa6.35□□□□□ -1.39
COTL1-204ENST00000564662 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
COTL1-204ENST00000564662 H3BS24 57 aa6.2□□□□□ -1.42
COTL1-204ENST00000564662 KRTAP19-4Q3LI73 84 aa6.19□□□□□ -1.42
COTL1-204ENST00000564662 KRTAP15-1Q3LI76 137 aa6.13□□□□□ -1.43
COTL1-204ENST00000564662 KRTAP4-11Q9BYQ6 195 aa6.12□□□□□ -1.43
COTL1-204ENST00000564662 LCE3CQ5T5A8 94 aa6.11□□□□□ -1.43
COTL1-204ENST00000564662 ROMO1P60602 79 aa6.09□□□□□ -1.43
COTL1-204ENST00000564662 KRTAP5-2Q701N4 177 aa6.07□□□□□ -1.44
COTL1-204ENST00000564662 MT1AP04731 61 aa6.05□□□□□ -1.44
COTL1-204ENST00000564662 KRTAP6-1Q3LI64 71 aa6.05□□□□□ -1.44
COTL1-204ENST00000564662 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
COTL1-204ENST00000564662 KRTAP5-8O75690 187 aa5.93□□□□□ -1.46
COTL1-204ENST00000564662 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
COTL1-204ENST00000564662 OBSCNQ5VST9 7968 aa5.84□□□□□ -1.48
COTL1-204ENST00000564662 MUC5ACP98088 5654 aa5.83□□□□□ -1.48
COTL1-204ENST00000564662 KRTAP6-2Q3LI66 62 aa5.83□□□□□ -1.48
COTL1-204ENST00000564662 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
COTL1-204ENST00000564662 AHNAKQ09666 5890 aaKnown RBP5.8□□□□□ -1.48
COTL1-204ENST00000564662 MUC5BQ9HC84 5762 aaPredicted RBP5.75□□□□□ -1.49
COTL1-204ENST00000564662 KRTAP9-9Q9BYP9 154 aa5.68□□□□□ -1.5
COTL1-204ENST00000564662 MT3P25713 68 aa5.53□□□□□ -1.52
COTL1-204ENST00000564662 NDUFAF8A1L188 74 aa5.5□□□□□ -1.53
COTL1-204ENST00000564662 KRTAP5-1Q6L8H4 278 aa5.5□□□□□ -1.53
COTL1-204ENST00000564662 A0A0A0MQY5 61 aa5.21□□□□□ -1.58
COTL1-204ENST00000564662 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
COTL1-204ENST00000564662 LCE1EQ5T753 118 aa5.12□□□□□ -1.59
COTL1-204ENST00000564662 LCE1BQ5T7P3 118 aa4.92□□□□□ -1.62
COTL1-204ENST00000564662 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
COTL1-204ENST00000564662 LCE1CQ5T751 118 aa4.76□□□□□ -1.65
COTL1-204ENST00000564662 INE1O15225 51 aa4.74□□□□□ -1.65
COTL1-204ENST00000564662 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
COTL1-204ENST00000564662 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
COTL1-204ENST00000564662 LCE3DQ9BYE3 92 aa4.34□□□□□ -1.71
COTL1-204ENST00000564662 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
COTL1-204ENST00000564662 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
COTL1-204ENST00000564662 PHGR1C9JFL3 82 aa4.07□□□□□ -1.76
COTL1-204ENST00000564662 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
COTL1-204ENST00000564662 KRTAP21-2Q3LI59 83 aa3.97□□□□□ -1.77
COTL1-204ENST00000564662 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
COTL1-204ENST00000564662 MUC19Q7Z5P9 8384 aa3.61□□□□□ -1.83
COTL1-204ENST00000564662 PRM1P04553 51 aa3.15□□□□□ -1.91
COTL1-204ENST00000564662 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
COTL1-204ENST00000564662 MUC16Q8WXI7 14507 aa2.57□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms