RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 KRTAP2-4Q9BYR9 128 aa5.3□□□□□ -1.56
CNOT1-206ENST00000564557 A8MU10 97 aa5.25□□□□□ -1.57
CNOT1-206ENST00000564557 SPRR2DP22532 72 aa5.25□□□□□ -1.57
CNOT1-206ENST00000564557 LINC01558Q9Y6Z2 57 aa5.24□□□□□ -1.57
CNOT1-206ENST00000564557 MT3P25713 68 aa5.19□□□□□ -1.58
CNOT1-206ENST00000564557 UQCR11O14957 56 aa5.15□□□□□ -1.59
CNOT1-206ENST00000564557 KRTAP2-1Q9BYU5 128 aa5.14□□□□□ -1.59
CNOT1-206ENST00000564557 TNP1P09430 55 aa5.11□□□□□ -1.59
CNOT1-206ENST00000564557 KRTAP19-7Q3SYF9 63 aa5.09□□□□□ -1.59
CNOT1-206ENST00000564557 MT1EP04732 61 aa5.06□□□□□ -1.6
CNOT1-206ENST00000564557 V9GYY9 64 aa5.06□□□□□ -1.6
CNOT1-206ENST00000564557 C10orf95Q9H7T3 257 aa5.05□□□□□ -1.6
CNOT1-206ENST00000564557 MIR22HGQ0VDD5 57 aa5.04□□□□□ -1.6
CNOT1-206ENST00000564557 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
CNOT1-206ENST00000564557 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
CNOT1-206ENST00000564557 K7ERS5 55 aa5□□□□□ -1.61
CNOT1-206ENST00000564557 PSPHP1O15172 72 aa4.98□□□□□ -1.61
CNOT1-206ENST00000564557 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
CNOT1-206ENST00000564557 KRTAP5-11Q6L8G4 156 aa4.96□□□□□ -1.62
CNOT1-206ENST00000564557 Q1T7F1 81 aa4.95□□□□□ -1.62
CNOT1-206ENST00000564557 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.95□□□□□ -1.62
CNOT1-206ENST00000564557 PP632Q6XCG6 107 aa4.95□□□□□ -1.62
CNOT1-206ENST00000564557 MT1GP13640 62 aa4.93□□□□□ -1.62
CNOT1-206ENST00000564557 LCE1EQ5T753 118 aa4.93□□□□□ -1.62
CNOT1-206ENST00000564557 A6NED7 52 aa4.85□□□□□ -1.63
CNOT1-206ENST00000564557 MT1LQ93083 61 aa4.85□□□□□ -1.63
CNOT1-206ENST00000564557 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
CNOT1-206ENST00000564557 MT1MQ8N339 61 aa4.82□□□□□ -1.64
CNOT1-206ENST00000564557 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
CNOT1-206ENST00000564557 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
CNOT1-206ENST00000564557 RPS28P62857 69 aaKnown RBP4.78□□□□□ -1.64
CNOT1-206ENST00000564557 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
CNOT1-206ENST00000564557 LCE1FQ5T754 118 aa4.69□□□□□ -1.66
CNOT1-206ENST00000564557 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
CNOT1-206ENST00000564557 ROMO1P60602 79 aa4.6□□□□□ -1.67
CNOT1-206ENST00000564557 MT4P47944 62 aa4.58□□□□□ -1.68
CNOT1-206ENST00000564557 KRTAP5-4Q6L8H1 288 aa4.5□□□□□ -1.69
CNOT1-206ENST00000564557 PRAC1Q96KF2 57 aa4.43□□□□□ -1.7
CNOT1-206ENST00000564557 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
CNOT1-206ENST00000564557 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
CNOT1-206ENST00000564557 HMCN1Q96RW7 5635 aa4.42□□□□□ -1.7
CNOT1-206ENST00000564557 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
CNOT1-206ENST00000564557 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
CNOT1-206ENST00000564557 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
CNOT1-206ENST00000564557 KRTAP12-4P60329 112 aa4.34□□□□□ -1.71
CNOT1-206ENST00000564557 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
CNOT1-206ENST00000564557 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
CNOT1-206ENST00000564557 BRK1Q8WUW1 75 aa4.26□□□□□ -1.73
CNOT1-206ENST00000564557 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
CNOT1-206ENST00000564557 AHNAK2Q8IVF2 5795 aa4.23□□□□□ -1.73
CNOT1-206ENST00000564557 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
CNOT1-206ENST00000564557 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
CNOT1-206ENST00000564557 MT1AP04731 61 aa4.14□□□□□ -1.75
CNOT1-206ENST00000564557 KRTAP4-4Q9BYR3 166 aa4.12□□□□□ -1.75
CNOT1-206ENST00000564557 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
CNOT1-206ENST00000564557 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
CNOT1-206ENST00000564557 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
CNOT1-206ENST00000564557 KRTAP5-7Q6L8G8 165 aa4.01□□□□□ -1.77
CNOT1-206ENST00000564557 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
CNOT1-206ENST00000564557 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
CNOT1-206ENST00000564557 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
CNOT1-206ENST00000564557 PRO0628Q9UI54 55 aa3.74□□□□□ -1.81
CNOT1-206ENST00000564557 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
CNOT1-206ENST00000564557 KTN1-AS1Q86SY8 53 aa3.57□□□□□ -1.84
CNOT1-206ENST00000564557 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.86
CNOT1-206ENST00000564557 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
CNOT1-206ENST00000564557 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
CNOT1-206ENST00000564557 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
CNOT1-206ENST00000564557 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
CNOT1-206ENST00000564557 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
CNOT1-206ENST00000564557 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
CNOT1-206ENST00000564557 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
CNOT1-206ENST00000564557 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
CNOT1-206ENST00000564557 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
CNOT1-206ENST00000564557 PRM1P04553 51 aa2.34□□□□□ -2.03
CNOT1-206ENST00000564557 INE1O15225 51 aa2.16□□□□□ -2.06
CNOT1-206ENST00000564557 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
CNOT1-206ENST00000564557 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 51.4 ms