RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 K7ERS5 55 aa6.26□□□□□ -1.41
USB1-209ENST00000564387 MT1GP13640 62 aa6.22□□□□□ -1.41
USB1-209ENST00000564387 A6NED7 52 aa6.21□□□□□ -1.42
USB1-209ENST00000564387 KRTAP25-1Q3LHN0 102 aa6.19□□□□□ -1.42
USB1-209ENST00000564387 MT1LQ93083 61 aa6.18□□□□□ -1.42
USB1-209ENST00000564387 PP632Q6XCG6 107 aa6.13□□□□□ -1.43
USB1-209ENST00000564387 MT1MQ8N339 61 aa6.11□□□□□ -1.43
USB1-209ENST00000564387 KRTAP12-3P60328 96 aa6.1□□□□□ -1.43
USB1-209ENST00000564387 DSTQ03001 7570 aaKnown RBP6.04□□□□□ -1.44
USB1-209ENST00000564387 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
USB1-209ENST00000564387 CDC42SE1Q9NRR8 79 aa6.02□□□□□ -1.45
USB1-209ENST00000564387 KRTAP4-3Q9BYR4 195 aa5.92□□□□□ -1.46
USB1-209ENST00000564387 ROMO1P60602 79 aa5.91□□□□□ -1.46
USB1-209ENST00000564387 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
USB1-209ENST00000564387 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
USB1-209ENST00000564387 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
USB1-209ENST00000564387 LCE4AQ5TA78 99 aa5.76□□□□□ -1.49
USB1-209ENST00000564387 KRTAP5-4Q6L8H1 288 aa5.75□□□□□ -1.49
USB1-209ENST00000564387 KRTAP4-9Q9BYQ8 210 aa5.75□□□□□ -1.49
USB1-209ENST00000564387 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
USB1-209ENST00000564387 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.5
USB1-209ENST00000564387 KRTAP5-5Q701N2 237 aaPredicted RBP5.63□□□□□ -1.51
USB1-209ENST00000564387 MT4P47944 62 aa5.59□□□□□ -1.51
USB1-209ENST00000564387 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.52
USB1-209ENST00000564387 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
USB1-209ENST00000564387 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
USB1-209ENST00000564387 KRTAP4-6Q9BYQ5 205 aa5.52□□□□□ -1.53
USB1-209ENST00000564387 GPR98Q8WXG9 6306 aa5.46□□□□□ -1.54
USB1-209ENST00000564387 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
USB1-209ENST00000564387 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
USB1-209ENST00000564387 KRTAP20-2Q3LI61 65 aa5.36□□□□□ -1.55
USB1-209ENST00000564387 KRTAP9-6A8MVA2 160 aa5.35□□□□□ -1.55
USB1-209ENST00000564387 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
USB1-209ENST00000564387 MT1AP04731 61 aa5.27□□□□□ -1.57
USB1-209ENST00000564387 AHNAK2Q8IVF2 5795 aa5.25□□□□□ -1.57
USB1-209ENST00000564387 PMAIP1Q13794 54 aa5.24□□□□□ -1.57
USB1-209ENST00000564387 KRTAP5-3Q6L8H2 238 aa5.24□□□□□ -1.57
USB1-209ENST00000564387 KRTAP6-1Q3LI64 71 aa5.21□□□□□ -1.58
USB1-209ENST00000564387 KRTAP5-10Q6L8G5 202 aa5.2□□□□□ -1.58
USB1-209ENST00000564387 PRO0628Q9UI54 55 aa5.17□□□□□ -1.58
USB1-209ENST00000564387 KRTAP5-2Q701N4 177 aa5.08□□□□□ -1.6
USB1-209ENST00000564387 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
USB1-209ENST00000564387 H3BS24 57 aa5.06□□□□□ -1.6
USB1-209ENST00000564387 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
USB1-209ENST00000564387 KRTAP5-7Q6L8G8 165 aa4.97□□□□□ -1.61
USB1-209ENST00000564387 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
USB1-209ENST00000564387 SVIPQ8NHG7 77 aa4.92□□□□□ -1.62
USB1-209ENST00000564387 KTN1-AS1Q86SY8 53 aa4.87□□□□□ -1.63
USB1-209ENST00000564387 KRTAP4-11Q9BYQ6 195 aa4.84□□□□□ -1.63
USB1-209ENST00000564387 MT3P25713 68 aa4.8□□□□□ -1.64
USB1-209ENST00000564387 KRTAP4-12Q9BQ66 201 aa4.77□□□□□ -1.65
USB1-209ENST00000564387 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
USB1-209ENST00000564387 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
USB1-209ENST00000564387 KRTAP9-9Q9BYP9 154 aa4.54□□□□□ -1.68
USB1-209ENST00000564387 KRTAP5-1Q6L8H4 278 aa4.5□□□□□ -1.69
USB1-209ENST00000564387 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
USB1-209ENST00000564387 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
USB1-209ENST00000564387 MUC5BQ9HC84 5762 aaPredicted RBP4.3□□□□□ -1.72
USB1-209ENST00000564387 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
USB1-209ENST00000564387 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
USB1-209ENST00000564387 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
USB1-209ENST00000564387 LCE3DQ9BYE3 92 aa4.1□□□□□ -1.75
USB1-209ENST00000564387 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
USB1-209ENST00000564387 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
USB1-209ENST00000564387 A0A0A0MQY5 61 aa4□□□□□ -1.77
USB1-209ENST00000564387 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
USB1-209ENST00000564387 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
USB1-209ENST00000564387 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
USB1-209ENST00000564387 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
USB1-209ENST00000564387 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
USB1-209ENST00000564387 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
USB1-209ENST00000564387 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
USB1-209ENST00000564387 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
USB1-209ENST00000564387 PRM1P04553 51 aa3.02□□□□□ -1.93
USB1-209ENST00000564387 INE1O15225 51 aa3□□□□□ -1.93
USB1-209ENST00000564387 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
USB1-209ENST00000564387 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
USB1-209ENST00000564387 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms