RNA–Protein interactions for RNA: ENST00000564216.5

CSK-206, Transcript of C-terminal Src kinase, human

TSL 3

Gene CSK, Length 978 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-206	ENST00000564216	PP632	Q6XCG6	107 aa		5.76	□□□□□ -1.49
CSK-206	ENST00000564216	MIR22HG	Q0VDD5	57 aa		5.74	□□□□□ -1.49
CSK-206	ENST00000564216	PSPHP1	O15172	72 aa		5.73	□□□□□ -1.49
CSK-206	ENST00000564216	LCE3A	Q5TA76	89 aa		5.73	□□□□□ -1.49
CSK-206	ENST00000564216		K7ERS5	55 aa		5.68	□□□□□ -1.5
CSK-206	ENST00000564216	MT1L	Q93083	61 aa		5.67	□□□□□ -1.5
CSK-206	ENST00000564216	MT1M	Q8N339	61 aa		5.63	□□□□□ -1.51
CSK-206	ENST00000564216	KRTAP25-1	Q3LHN0	102 aa		5.6	□□□□□ -1.51
CSK-206	ENST00000564216	KRTAP12-3	P60328	96 aa		5.57	□□□□□ -1.52
CSK-206	ENST00000564216		A6NED7	52 aa		5.53	□□□□□ -1.52
CSK-206	ENST00000564216	LCE4A	Q5TA78	99 aa		5.46	□□□□□ -1.54
CSK-206	ENST00000564216	KRTAP23-1	A1A580	65 aa		5.45	□□□□□ -1.54
CSK-206	ENST00000564216	KRTAP4-9	Q9BYQ8	210 aa		5.45	□□□□□ -1.54
CSK-206	ENST00000564216	GPR98	Q8WXG9	6306 aa		5.42	□□□□□ -1.54
CSK-206	ENST00000564216	KRTAP4-3	Q9BYR4	195 aa		5.42	□□□□□ -1.54
CSK-206	ENST00000564216	KRTAP19-4	Q3LI73	84 aa		5.41	□□□□□ -1.54
CSK-206	ENST00000564216	LCE1D	Q5T752	114 aa		5.37	□□□□□ -1.55
CSK-206	ENST00000564216	CDC42SE1	Q9NRR8	79 aa		5.37	□□□□□ -1.55
CSK-206	ENST00000564216	HMCN1	Q96RW7	5635 aa		5.35	□□□□□ -1.55
CSK-206	ENST00000564216	KRTAP5-4	Q6L8H1	288 aa		5.35	□□□□□ -1.55
CSK-206	ENST00000564216	KRTAP4-7	Q9BYR0	210 aa		5.32	□□□□□ -1.56
CSK-206	ENST00000564216	MT4	P47944	62 aa		5.3	□□□□□ -1.56
CSK-206	ENST00000564216	ROMO1	P60602	79 aa		5.26	□□□□□ -1.57
CSK-206	ENST00000564216	KRTAP15-1	Q3LI76	137 aa		5.24	□□□□□ -1.57
CSK-206	ENST00000564216	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.17	□□□□□ -1.58
CSK-206	ENST00000564216	KRTAP4-6	Q9BYQ5	205 aa		5.16	□□□□□ -1.58
CSK-206	ENST00000564216	LCE3C	Q5T5A8	94 aa		5.13	□□□□□ -1.59
CSK-206	ENST00000564216	BRK1	Q8WUW1	75 aa		5.13	□□□□□ -1.59
CSK-206	ENST00000564216	AHNAK2	Q8IVF2	5795 aa		5.13	□□□□□ -1.59
CSK-206	ENST00000564216	SPRR5	A0A1B0GTR4	108 aa		5.07	□□□□□ -1.6
CSK-206	ENST00000564216	KRTAP12-4	P60329	112 aa		5.07	□□□□□ -1.6
CSK-206	ENST00000564216	LOC100996750	A0A140TA64	210 aa		5.05	□□□□□ -1.6
CSK-206	ENST00000564216	SYNE1	Q8NF91	8797 aa	Known RBP	5.02	□□□□□ -1.61
CSK-206	ENST00000564216	KRTAP20-2	Q3LI61	65 aa		5.02	□□□□□ -1.61
CSK-206	ENST00000564216	KRTAP5-10	Q6L8G5	202 aa		4.96	□□□□□ -1.62
CSK-206	ENST00000564216	KRTAP5-3	Q6L8H2	238 aa		4.87	□□□□□ -1.63
CSK-206	ENST00000564216	MT1A	P04731	61 aa		4.85	□□□□□ -1.63
CSK-206	ENST00000564216	PMAIP1	Q13794	54 aa		4.85	□□□□□ -1.63
CSK-206	ENST00000564216	KRTAP5-7	Q6L8G8	165 aa		4.79	□□□□□ -1.64
CSK-206	ENST00000564216	KRTAP9-6	A8MVA2	160 aa		4.78	□□□□□ -1.64
CSK-206	ENST00000564216	PRO0628	Q9UI54	55 aa		4.78	□□□□□ -1.64
CSK-206	ENST00000564216	KRTAP6-1	Q3LI64	71 aa		4.77	□□□□□ -1.65
CSK-206	ENST00000564216	KRTAP5-2	Q701N4	177 aa		4.7	□□□□□ -1.66
CSK-206	ENST00000564216	KRTAP9-4	Q9BYQ2	154 aa		4.69	□□□□□ -1.66
CSK-206	ENST00000564216	PRAC1	Q96KF2	57 aa		4.61	□□□□□ -1.67
CSK-206	ENST00000564216	KRTAP4-11	Q9BYQ6	195 aa		4.58	□□□□□ -1.68
CSK-206	ENST00000564216	KRTAP6-2	Q3LI66	62 aa		4.56	□□□□□ -1.68
CSK-206	ENST00000564216	KTN1-AS1	Q86SY8	53 aa		4.49	□□□□□ -1.69
CSK-206	ENST00000564216	MT3	P25713	68 aa		4.47	□□□□□ -1.69
CSK-206	ENST00000564216	KRTAP5-8	O75690	187 aa		4.41	□□□□□ -1.7
CSK-206	ENST00000564216	OBSCN	Q5VST9	7968 aa		4.39	□□□□□ -1.71
CSK-206	ENST00000564216		H3BS24	57 aa		4.25	□□□□□ -1.73
CSK-206	ENST00000564216	AHNAK	Q09666	5890 aa	Known RBP	4.24	□□□□□ -1.73
CSK-206	ENST00000564216	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.23	□□□□□ -1.73
CSK-206	ENST00000564216	KRTAP9-9	Q9BYP9	154 aa		4.2	□□□□□ -1.74
CSK-206	ENST00000564216	KRTAP5-1	Q6L8H4	278 aa		4.18	□□□□□ -1.74
CSK-206	ENST00000564216	MUC5AC	P98088	5654 aa		4.17	□□□□□ -1.74
CSK-206	ENST00000564216		A0A0A0MQY5	61 aa		4.12	□□□□□ -1.75
CSK-206	ENST00000564216	LCE1E	Q5T753	118 aa		4.11	□□□□□ -1.75
CSK-206	ENST00000564216	KRTAP4-2	Q9BYR5	136 aa		3.8	□□□□□ -1.8
CSK-206	ENST00000564216	LCE1C	Q5T751	118 aa		3.79	□□□□□ -1.8
CSK-206	ENST00000564216	LCE1B	Q5T7P3	118 aa		3.79	□□□□□ -1.8
CSK-206	ENST00000564216	LUZP6	Q538Z0	58 aa		3.77	□□□□□ -1.81
CSK-206	ENST00000564216	LCE3D	Q9BYE3	92 aa		3.73	□□□□□ -1.81
CSK-206	ENST00000564216	LCE3E	Q5T5B0	92 aa		3.52	□□□□□ -1.85
CSK-206	ENST00000564216	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.47	□□□□□ -1.85
CSK-206	ENST00000564216	KRTAP5-11	Q6L8G4	156 aa		3.42	□□□□□ -1.86
CSK-206	ENST00000564216	NDUFAF8	A1L188	74 aa		3.39	□□□□□ -1.87
CSK-206	ENST00000564216	LCE1F	Q5T754	118 aa		3.36	□□□□□ -1.87
CSK-206	ENST00000564216	KRTAP4-12	Q9BQ66	201 aa		3.36	□□□□□ -1.87
CSK-206	ENST00000564216	KRTAP21-2	Q3LI59	83 aa		3.16	□□□□□ -1.9
CSK-206	ENST00000564216	PHGR1	C9JFL3	82 aa		2.95	□□□□□ -1.94
CSK-206	ENST00000564216	INE1	O15225	51 aa		2.88	□□□□□ -1.95
CSK-206	ENST00000564216	KRTAP4-4	Q9BYR3	166 aa		2.81	□□□□□ -1.96
CSK-206	ENST00000564216	MUC19	Q7Z5P9	8384 aa		2.72	□□□□□ -1.97
CSK-206	ENST00000564216	PRM1	P04553	51 aa		2.67	□□□□□ -1.98
CSK-206	ENST00000564216	KRTAP21-1	Q3LI58	79 aa		2.23	□□□□□ -2.05
CSK-206	ENST00000564216	MUC16	Q8WXI7	14507 aa		1.9	□□□□□ -2.11

Retrieved 78 of 20,778 RNA–protein pairs in 38.2 ms