RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 DSTQ03001 7570 aaKnown RBP2.2□□□□□ -2.06
TUBGCP4-207ENST00000563963 MT1HP80294 61 aa2.19□□□□□ -2.06
TUBGCP4-207ENST00000563963 SPRR2DP22532 72 aa2.17□□□□□ -2.06
TUBGCP4-207ENST00000563963 USH2AO75445 5202 aa2.16□□□□□ -2.06
TUBGCP4-207ENST00000563963 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
TUBGCP4-207ENST00000563963 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
TUBGCP4-207ENST00000563963 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
TUBGCP4-207ENST00000563963 LCE3AQ5TA76 89 aa2.15□□□□□ -2.07
TUBGCP4-207ENST00000563963 KRTAP4-8Q9BYQ9 185 aa2.14□□□□□ -2.07
TUBGCP4-207ENST00000563963 KRTAP8-1Q8IUC2 63 aa2.13□□□□□ -2.07
TUBGCP4-207ENST00000563963 KRTAP19-2Q3LHN2 52 aa2.12□□□□□ -2.07
TUBGCP4-207ENST00000563963 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
TUBGCP4-207ENST00000563963 LCE1EQ5T753 118 aa2.11□□□□□ -2.07
TUBGCP4-207ENST00000563963 KRTAP4-1Q9BYQ7 146 aa2.1□□□□□ -2.07
TUBGCP4-207ENST00000563963 KRTAP12-3P60328 96 aa2.1□□□□□ -2.07
TUBGCP4-207ENST00000563963 FCGBPQ9Y6R7 5405 aaPredicted RBP2.08□□□□□ -2.08
TUBGCP4-207ENST00000563963 KRTAP10-12P60413 245 aa2.08□□□□□ -2.08
TUBGCP4-207ENST00000563963 SPRR2GQ9BYE4 73 aa2.08□□□□□ -2.08
TUBGCP4-207ENST00000563963 KRTAP19-6Q3LI70 58 aa2.07□□□□□ -2.08
TUBGCP4-207ENST00000563963 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
TUBGCP4-207ENST00000563963 MDN1Q9NU22 5596 aa2.06□□□□□ -2.08
TUBGCP4-207ENST00000563963 LCE3BQ5TA77 95 aa2.06□□□□□ -2.08
TUBGCP4-207ENST00000563963 LCE3CQ5T5A8 94 aa2.04□□□□□ -2.08
TUBGCP4-207ENST00000563963 SPRR2FQ96RM1 72 aa2.03□□□□□ -2.08
TUBGCP4-207ENST00000563963 KRTAP9-8Q9BYQ0 159 aa2.02□□□□□ -2.09
TUBGCP4-207ENST00000563963 LCE1DQ5T752 114 aa2.01□□□□□ -2.09
TUBGCP4-207ENST00000563963 MT2AP02795 61 aa2.01□□□□□ -2.09
TUBGCP4-207ENST00000563963 KRTAP10-5P60370 271 aa2□□□□□ -2.09
TUBGCP4-207ENST00000563963 KRTAP4-2Q9BYR5 136 aa2□□□□□ -2.09
TUBGCP4-207ENST00000563963 KRTAP4-9Q9BYQ8 210 aa1.98□□□□□ -2.09
TUBGCP4-207ENST00000563963 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
TUBGCP4-207ENST00000563963 KRTAP19-8Q3LI54 63 aa1.96□□□□□ -2.1
TUBGCP4-207ENST00000563963 LCE3EQ5T5B0 92 aa1.96□□□□□ -2.1
TUBGCP4-207ENST00000563963 KRTAP10-7P60409 375 aaPredicted RBP1.94□□□□□ -2.1
TUBGCP4-207ENST00000563963 MT1FP04733 61 aa1.94□□□□□ -2.1
TUBGCP4-207ENST00000563963 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
TUBGCP4-207ENST00000563963 KRTAP5-9P26371 169 aa1.91□□□□□ -2.1
TUBGCP4-207ENST00000563963 MT1XP80297 61 aa1.91□□□□□ -2.1
TUBGCP4-207ENST00000563963 KRTAP4-7Q9BYR0 210 aa1.9□□□□□ -2.11
TUBGCP4-207ENST00000563963 MT4P47944 62 aa1.89□□□□□ -2.11
TUBGCP4-207ENST00000563963 PRM1P04553 51 aa1.88□□□□□ -2.11
TUBGCP4-207ENST00000563963 MT1BP07438 61 aa1.88□□□□□ -2.11
TUBGCP4-207ENST00000563963 KRTAP19-5Q3LI72 72 aa1.88□□□□□ -2.11
TUBGCP4-207ENST00000563963 KRTAP5-3Q6L8H2 238 aa1.87□□□□□ -2.11
TUBGCP4-207ENST00000563963 OBSCNQ5VST9 7968 aa1.84□□□□□ -2.11
TUBGCP4-207ENST00000563963 KRTAP4-8A0A0G2JLE6 195 aa1.82□□□□□ -2.12
TUBGCP4-207ENST00000563963 LCE3DQ9BYE3 92 aa1.81□□□□□ -2.12
TUBGCP4-207ENST00000563963 KRTAP4-11Q9BYQ6 195 aa1.8□□□□□ -2.12
TUBGCP4-207ENST00000563963 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
TUBGCP4-207ENST00000563963 KRTAP9-6A8MVA2 160 aa1.74□□□□□ -2.13
TUBGCP4-207ENST00000563963 MT1LQ93083 61 aa1.7□□□□□ -2.14
TUBGCP4-207ENST00000563963 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
TUBGCP4-207ENST00000563963 MUC12Q9UKN1 5478 aa1.68□□□□□ -2.14
TUBGCP4-207ENST00000563963 KRTAP19-7Q3SYF9 63 aa1.68□□□□□ -2.14
TUBGCP4-207ENST00000563963 MT1EP04732 61 aa1.67□□□□□ -2.14
TUBGCP4-207ENST00000563963 KRTAP5-4Q6L8H1 288 aa1.66□□□□□ -2.14
TUBGCP4-207ENST00000563963 MT1AP04731 61 aa1.63□□□□□ -2.15
TUBGCP4-207ENST00000563963 MT1GP13640 62 aa1.61□□□□□ -2.15
TUBGCP4-207ENST00000563963 KRTAP5-5Q701N2 237 aaPredicted RBP1.61□□□□□ -2.15
TUBGCP4-207ENST00000563963 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
TUBGCP4-207ENST00000563963 KRTAP19-3Q7Z4W3 81 aa1.56□□□□□ -2.16
TUBGCP4-207ENST00000563963 MT1MQ8N339 61 aa1.56□□□□□ -2.16
TUBGCP4-207ENST00000563963 KRTAP4-3Q9BYR4 195 aa1.52□□□□□ -2.17
TUBGCP4-207ENST00000563963 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
TUBGCP4-207ENST00000563963 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
TUBGCP4-207ENST00000563963 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
TUBGCP4-207ENST00000563963 KRTAP5-11Q6L8G4 156 aa1.46□□□□□ -2.18
TUBGCP4-207ENST00000563963 KRTAP6-1Q3LI64 71 aa1.42□□□□□ -2.18
TUBGCP4-207ENST00000563963 KRTAP5-1Q6L8H4 278 aa1.4□□□□□ -2.18
TUBGCP4-207ENST00000563963 LCE1CQ5T751 118 aa1.39□□□□□ -2.19
TUBGCP4-207ENST00000563963 LCE1BQ5T7P3 118 aa1.39□□□□□ -2.19
TUBGCP4-207ENST00000563963 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
TUBGCP4-207ENST00000563963 KRTAP4-4Q9BYR3 166 aa1.33□□□□□ -2.2
TUBGCP4-207ENST00000563963 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.31□□□□□ -2.2
TUBGCP4-207ENST00000563963 KRTAP5-2Q701N4 177 aa1.29□□□□□ -2.2
TUBGCP4-207ENST00000563963 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
TUBGCP4-207ENST00000563963 KRTAP21-2Q3LI59 83 aa0.88□□□□□ -2.27
TUBGCP4-207ENST00000563963 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 38.1 ms