RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 SPRR2EP22531 72 aa3.37□□□□□ -1.87
NSMCE1-206ENST00000563900 SPRR2BP35325 72 aa3.37□□□□□ -1.87
NSMCE1-206ENST00000563900 SPRR2AP35326 72 aa3.37□□□□□ -1.87
NSMCE1-206ENST00000563900 Q1T7F1 81 aa3.37□□□□□ -1.87
NSMCE1-206ENST00000563900 V9GYY9 64 aa3.35□□□□□ -1.87
NSMCE1-206ENST00000563900 KRTAP19-7Q3SYF9 63 aa3.34□□□□□ -1.87
NSMCE1-206ENST00000563900 C10orf95Q9H7T3 257 aa3.34□□□□□ -1.87
NSMCE1-206ENST00000563900 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
NSMCE1-206ENST00000563900 PSPHP1O15172 72 aa3.31□□□□□ -1.88
NSMCE1-206ENST00000563900 RPS28P62857 69 aaKnown RBP3.31□□□□□ -1.88
NSMCE1-206ENST00000563900 MIR22HGQ0VDD5 57 aa3.31□□□□□ -1.88
NSMCE1-206ENST00000563900 MT1EP04732 61 aa3.29□□□□□ -1.88
NSMCE1-206ENST00000563900 KRTAP2-3P0C7H8 128 aa3.28□□□□□ -1.88
NSMCE1-206ENST00000563900 KRTAP2-4Q9BYR9 128 aa3.28□□□□□ -1.88
NSMCE1-206ENST00000563900 TNP1P09430 55 aa3.26□□□□□ -1.89
NSMCE1-206ENST00000563900 SPRR2DP22532 72 aa3.26□□□□□ -1.89
NSMCE1-206ENST00000563900 KRTAP19-5Q3LI72 72 aa3.24□□□□□ -1.89
NSMCE1-206ENST00000563900 LCE3AQ5TA76 89 aa3.24□□□□□ -1.89
NSMCE1-206ENST00000563900 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
NSMCE1-206ENST00000563900 KRTAP19-3Q7Z4W3 81 aa3.23□□□□□ -1.89
NSMCE1-206ENST00000563900 A6NED7 52 aa3.2□□□□□ -1.9
NSMCE1-206ENST00000563900 K7ERS5 55 aa3.19□□□□□ -1.9
NSMCE1-206ENST00000563900 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
NSMCE1-206ENST00000563900 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
NSMCE1-206ENST00000563900 KRTAP25-1Q3LHN0 102 aa3.16□□□□□ -1.9
NSMCE1-206ENST00000563900 MT1LQ93083 61 aa3.16□□□□□ -1.9
NSMCE1-206ENST00000563900 MT1GP13640 62 aa3.15□□□□□ -1.91
NSMCE1-206ENST00000563900 KRTAP12-3P60328 96 aa3.11□□□□□ -1.91
NSMCE1-206ENST00000563900 MT1MQ8N339 61 aa3.11□□□□□ -1.91
NSMCE1-206ENST00000563900 CDC42SE1Q9NRR8 79 aa3.11□□□□□ -1.91
NSMCE1-206ENST00000563900 PP632Q6XCG6 107 aa3.09□□□□□ -1.91
NSMCE1-206ENST00000563900 ROMO1P60602 79 aa3.04□□□□□ -1.92
NSMCE1-206ENST00000563900 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
NSMCE1-206ENST00000563900 PRO0628Q9UI54 55 aa3.03□□□□□ -1.92
NSMCE1-206ENST00000563900 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
NSMCE1-206ENST00000563900 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
NSMCE1-206ENST00000563900 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
NSMCE1-206ENST00000563900 LUZP6Q538Z0 58 aa2.88□□□□□ -1.95
NSMCE1-206ENST00000563900 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
NSMCE1-206ENST00000563900 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
NSMCE1-206ENST00000563900 BRK1Q8WUW1 75 aa2.87□□□□□ -1.95
NSMCE1-206ENST00000563900 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
NSMCE1-206ENST00000563900 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.96
NSMCE1-206ENST00000563900 MT4P47944 62 aa2.83□□□□□ -1.96
NSMCE1-206ENST00000563900 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
NSMCE1-206ENST00000563900 KRTAP9-6A8MVA2 160 aa2.76□□□□□ -1.97
NSMCE1-206ENST00000563900 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
NSMCE1-206ENST00000563900 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
NSMCE1-206ENST00000563900 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
NSMCE1-206ENST00000563900 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
NSMCE1-206ENST00000563900 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
NSMCE1-206ENST00000563900 PMAIP1Q13794 54 aa2.7□□□□□ -1.98
NSMCE1-206ENST00000563900 MT1AP04731 61 aa2.69□□□□□ -1.98
NSMCE1-206ENST00000563900 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
NSMCE1-206ENST00000563900 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
NSMCE1-206ENST00000563900 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
NSMCE1-206ENST00000563900 LCE1EQ5T753 118 aa2.55□□□□□ -2
NSMCE1-206ENST00000563900 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
NSMCE1-206ENST00000563900 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
NSMCE1-206ENST00000563900 KRTAP6-2Q3LI66 62 aa2.5□□□□□ -2.01
NSMCE1-206ENST00000563900 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
NSMCE1-206ENST00000563900 KTN1-AS1Q86SY8 53 aa2.49□□□□□ -2.01
NSMCE1-206ENST00000563900 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
NSMCE1-206ENST00000563900 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
NSMCE1-206ENST00000563900 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
NSMCE1-206ENST00000563900 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
NSMCE1-206ENST00000563900 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
NSMCE1-206ENST00000563900 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
NSMCE1-206ENST00000563900 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
NSMCE1-206ENST00000563900 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
NSMCE1-206ENST00000563900 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
NSMCE1-206ENST00000563900 INE1O15225 51 aa1.83□□□□□ -2.12
NSMCE1-206ENST00000563900 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
NSMCE1-206ENST00000563900 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
NSMCE1-206ENST00000563900 PRM1P04553 51 aa1.56□□□□□ -2.16
NSMCE1-206ENST00000563900 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
NSMCE1-206ENST00000563900 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
NSMCE1-206ENST00000563900 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 6.9 ms