RNA–Protein interactions for RNA: ENST00000563318.1

FANCA-210, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-210ENST00000563318 KRTAP2-4Q9BYR9 128 aa4.69□□□□□ -1.66
FANCA-210ENST00000563318 LINC01558Q9Y6Z2 57 aa4.69□□□□□ -1.66
FANCA-210ENST00000563318 A8MU10 97 aa4.67□□□□□ -1.66
FANCA-210ENST00000563318 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
FANCA-210ENST00000563318 SMIM26A0A096LP01 95 aa4.66□□□□□ -1.66
FANCA-210ENST00000563318 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
FANCA-210ENST00000563318 KRTAP5-3Q6L8H2 238 aa4.65□□□□□ -1.67
FANCA-210ENST00000563318 SPRR2DP22532 72 aa4.61□□□□□ -1.67
FANCA-210ENST00000563318 MT1EP04732 61 aa4.6□□□□□ -1.67
FANCA-210ENST00000563318 PRR15LQ9BU68 103 aa4.59□□□□□ -1.67
FANCA-210ENST00000563318 C10orf95Q9H7T3 257 aa4.56□□□□□ -1.68
FANCA-210ENST00000563318 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
FANCA-210ENST00000563318 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
FANCA-210ENST00000563318 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
FANCA-210ENST00000563318 UQCR11O14957 56 aa4.49□□□□□ -1.69
FANCA-210ENST00000563318 LCE3AQ5TA76 89 aa4.46□□□□□ -1.7
FANCA-210ENST00000563318 TNP1P09430 55 aa4.44□□□□□ -1.7
FANCA-210ENST00000563318 Q1T7F1 81 aa4.44□□□□□ -1.7
FANCA-210ENST00000563318 MT1LQ93083 61 aa4.41□□□□□ -1.7
FANCA-210ENST00000563318 MT1GP13640 62 aa4.4□□□□□ -1.71
FANCA-210ENST00000563318 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.71
FANCA-210ENST00000563318 MIR22HGQ0VDD5 57 aa4.39□□□□□ -1.71
FANCA-210ENST00000563318 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
FANCA-210ENST00000563318 V9GYY9 64 aa4.39□□□□□ -1.71
FANCA-210ENST00000563318 PSPHP1O15172 72 aa4.36□□□□□ -1.71
FANCA-210ENST00000563318 MT1MQ8N339 61 aa4.36□□□□□ -1.71
FANCA-210ENST00000563318 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
FANCA-210ENST00000563318 RPS28P62857 69 aaKnown RBP4.29□□□□□ -1.72
FANCA-210ENST00000563318 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
FANCA-210ENST00000563318 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
FANCA-210ENST00000563318 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
FANCA-210ENST00000563318 K7ERS5 55 aa4.2□□□□□ -1.74
FANCA-210ENST00000563318 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
FANCA-210ENST00000563318 A6NED7 52 aa4.18□□□□□ -1.74
FANCA-210ENST00000563318 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
FANCA-210ENST00000563318 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
FANCA-210ENST00000563318 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
FANCA-210ENST00000563318 CDC42SE1Q9NRR8 79 aa4.07□□□□□ -1.76
FANCA-210ENST00000563318 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
FANCA-210ENST00000563318 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
FANCA-210ENST00000563318 ROMO1P60602 79 aa4.03□□□□□ -1.76
FANCA-210ENST00000563318 MT4P47944 62 aa4□□□□□ -1.77
FANCA-210ENST00000563318 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
FANCA-210ENST00000563318 AHNAK2Q8IVF2 5795 aa3.97□□□□□ -1.77
FANCA-210ENST00000563318 PMAIP1Q13794 54 aa3.94□□□□□ -1.78
FANCA-210ENST00000563318 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
FANCA-210ENST00000563318 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
FANCA-210ENST00000563318 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
FANCA-210ENST00000563318 KRTAP20-2Q3LI61 65 aa3.86□□□□□ -1.79
FANCA-210ENST00000563318 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
FANCA-210ENST00000563318 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
FANCA-210ENST00000563318 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
FANCA-210ENST00000563318 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
FANCA-210ENST00000563318 KTN1-AS1Q86SY8 53 aa3.75□□□□□ -1.81
FANCA-210ENST00000563318 MT1AP04731 61 aa3.74□□□□□ -1.81
FANCA-210ENST00000563318 BRK1Q8WUW1 75 aa3.73□□□□□ -1.81
FANCA-210ENST00000563318 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
FANCA-210ENST00000563318 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
FANCA-210ENST00000563318 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
FANCA-210ENST00000563318 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
FANCA-210ENST00000563318 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
FANCA-210ENST00000563318 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
FANCA-210ENST00000563318 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
FANCA-210ENST00000563318 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
FANCA-210ENST00000563318 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
FANCA-210ENST00000563318 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
FANCA-210ENST00000563318 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
FANCA-210ENST00000563318 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
FANCA-210ENST00000563318 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
FANCA-210ENST00000563318 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
FANCA-210ENST00000563318 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
FANCA-210ENST00000563318 INE1O15225 51 aa2.63□□□□□ -1.99
FANCA-210ENST00000563318 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
FANCA-210ENST00000563318 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
FANCA-210ENST00000563318 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
FANCA-210ENST00000563318 PRM1P04553 51 aa2.07□□□□□ -2.08
FANCA-210ENST00000563318 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
FANCA-210ENST00000563318 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 107.5 ms