RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
NSMCE1-204ENST00000563273 TNP1P09430 55 aa4.41□□□□□ -1.7
NSMCE1-204ENST00000563273 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
NSMCE1-204ENST00000563273 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.71
NSMCE1-204ENST00000563273 TMEM258P61165 79 aa4.39□□□□□ -1.71
NSMCE1-204ENST00000563273 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
NSMCE1-204ENST00000563273 MT1LQ93083 61 aa4.36□□□□□ -1.71
NSMCE1-204ENST00000563273 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
NSMCE1-204ENST00000563273 UQCR11O14957 56 aa4.33□□□□□ -1.72
NSMCE1-204ENST00000563273 MT1MQ8N339 61 aa4.33□□□□□ -1.72
NSMCE1-204ENST00000563273 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
NSMCE1-204ENST00000563273 DSTQ03001 7570 aaKnown RBP4.3□□□□□ -1.72
NSMCE1-204ENST00000563273 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
NSMCE1-204ENST00000563273 PCP4P48539 62 aa4.26□□□□□ -1.73
NSMCE1-204ENST00000563273 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
NSMCE1-204ENST00000563273 KRTAP12-3P60328 96 aa4.21□□□□□ -1.74
NSMCE1-204ENST00000563273 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
NSMCE1-204ENST00000563273 V9GYY9 64 aa4.19□□□□□ -1.74
NSMCE1-204ENST00000563273 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
NSMCE1-204ENST00000563273 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
NSMCE1-204ENST00000563273 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
NSMCE1-204ENST00000563273 K7ERS5 55 aa4.15□□□□□ -1.75
NSMCE1-204ENST00000563273 Q1T7F1 81 aa4.13□□□□□ -1.75
NSMCE1-204ENST00000563273 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
NSMCE1-204ENST00000563273 MT4P47944 62 aa4.11□□□□□ -1.75
NSMCE1-204ENST00000563273 PSPHP1O15172 72 aa4.08□□□□□ -1.76
NSMCE1-204ENST00000563273 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
NSMCE1-204ENST00000563273 A0A0A0MQY5 61 aa4.01□□□□□ -1.77
NSMCE1-204ENST00000563273 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
NSMCE1-204ENST00000563273 A6NED7 52 aa3.96□□□□□ -1.78
NSMCE1-204ENST00000563273 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
NSMCE1-204ENST00000563273 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
NSMCE1-204ENST00000563273 KRTAP5-10Q6L8G5 202 aa3.93□□□□□ -1.78
NSMCE1-204ENST00000563273 RPS28P62857 69 aaKnown RBP3.92□□□□□ -1.78
NSMCE1-204ENST00000563273 CDC42SE1Q9NRR8 79 aa3.92□□□□□ -1.78
NSMCE1-204ENST00000563273 AHNAK2Q8IVF2 5795 aa3.91□□□□□ -1.78
NSMCE1-204ENST00000563273 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
NSMCE1-204ENST00000563273 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
NSMCE1-204ENST00000563273 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
NSMCE1-204ENST00000563273 ROMO1P60602 79 aa3.85□□□□□ -1.79
NSMCE1-204ENST00000563273 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
NSMCE1-204ENST00000563273 KRTAP5-7Q6L8G8 165 aa3.79□□□□□ -1.8
NSMCE1-204ENST00000563273 MT1AP04731 61 aa3.72□□□□□ -1.81
NSMCE1-204ENST00000563273 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
NSMCE1-204ENST00000563273 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
NSMCE1-204ENST00000563273 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
NSMCE1-204ENST00000563273 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
NSMCE1-204ENST00000563273 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
NSMCE1-204ENST00000563273 BRK1Q8WUW1 75 aa3.48□□□□□ -1.85
NSMCE1-204ENST00000563273 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
NSMCE1-204ENST00000563273 MT3P25713 68 aa3.41□□□□□ -1.86
NSMCE1-204ENST00000563273 PRO0628Q9UI54 55 aa3.37□□□□□ -1.87
NSMCE1-204ENST00000563273 PMAIP1Q13794 54 aa3.29□□□□□ -1.88
NSMCE1-204ENST00000563273 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
NSMCE1-204ENST00000563273 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
NSMCE1-204ENST00000563273 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
NSMCE1-204ENST00000563273 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
NSMCE1-204ENST00000563273 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
NSMCE1-204ENST00000563273 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
NSMCE1-204ENST00000563273 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
NSMCE1-204ENST00000563273 KTN1-AS1Q86SY8 53 aa3.13□□□□□ -1.91
NSMCE1-204ENST00000563273 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
NSMCE1-204ENST00000563273 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
NSMCE1-204ENST00000563273 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
NSMCE1-204ENST00000563273 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
NSMCE1-204ENST00000563273 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
NSMCE1-204ENST00000563273 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
NSMCE1-204ENST00000563273 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
NSMCE1-204ENST00000563273 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
NSMCE1-204ENST00000563273 LUZP6Q538Z0 58 aa2.62□□□□□ -1.99
NSMCE1-204ENST00000563273 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
NSMCE1-204ENST00000563273 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
NSMCE1-204ENST00000563273 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
NSMCE1-204ENST00000563273 INE1O15225 51 aa2□□□□□ -2.09
NSMCE1-204ENST00000563273 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
NSMCE1-204ENST00000563273 PRM1P04553 51 aa1.94□□□□□ -2.1
NSMCE1-204ENST00000563273 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
NSMCE1-204ENST00000563273 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 132.5 ms