RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 KRTAP23-1A1A580 65 aa6.9□□□□□ -1.3
RAB40C-207ENST00000563109 KTN1-AS1Q86SY8 53 aa6.89□□□□□ -1.31
RAB40C-207ENST00000563109 KRTAP12-3P60328 96 aa6.84□□□□□ -1.31
RAB40C-207ENST00000563109 KRTAP19-3Q7Z4W3 81 aa6.81□□□□□ -1.32
RAB40C-207ENST00000563109 PP632Q6XCG6 107 aa6.8□□□□□ -1.32
RAB40C-207ENST00000563109 SPRR2DP22532 72 aa6.79□□□□□ -1.32
RAB40C-207ENST00000563109 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
RAB40C-207ENST00000563109 PRAC1Q96KF2 57 aa6.73□□□□□ -1.33
RAB40C-207ENST00000563109 MT1LQ93083 61 aa6.72□□□□□ -1.33
RAB40C-207ENST00000563109 KRTAP20-1Q3LI63 56 aa6.7□□□□□ -1.34
RAB40C-207ENST00000563109 MT1GP13640 62 aa6.69□□□□□ -1.34
RAB40C-207ENST00000563109 KRTAP2-3P0C7H8 128 aa6.64□□□□□ -1.35
RAB40C-207ENST00000563109 KRTAP2-4Q9BYR9 128 aa6.64□□□□□ -1.35
RAB40C-207ENST00000563109 MT1MQ8N339 61 aa6.58□□□□□ -1.36
RAB40C-207ENST00000563109 LCE3BQ5TA77 95 aa6.56□□□□□ -1.36
RAB40C-207ENST00000563109 KRTAP15-1Q3LI76 137 aa6.55□□□□□ -1.36
RAB40C-207ENST00000563109 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
RAB40C-207ENST00000563109 KRTAP2-2Q9BYT5 123 aa6.46□□□□□ -1.38
RAB40C-207ENST00000563109 KRTAP2-1Q9BYU5 128 aa6.46□□□□□ -1.38
RAB40C-207ENST00000563109 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
RAB40C-207ENST00000563109 KRTAP4-3Q9BYR4 195 aa6.38□□□□□ -1.39
RAB40C-207ENST00000563109 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
RAB40C-207ENST00000563109 DSTQ03001 7570 aaKnown RBP6.33□□□□□ -1.4
RAB40C-207ENST00000563109 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
RAB40C-207ENST00000563109 LCE4AQ5TA78 99 aa6.03□□□□□ -1.44
RAB40C-207ENST00000563109 KRTAP5-4Q6L8H1 288 aa5.97□□□□□ -1.45
RAB40C-207ENST00000563109 KRTAP5-5Q701N2 237 aaPredicted RBP5.96□□□□□ -1.46
RAB40C-207ENST00000563109 KRTAP4-9Q9BYQ8 210 aa5.93□□□□□ -1.46
RAB40C-207ENST00000563109 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
RAB40C-207ENST00000563109 MT4P47944 62 aa5.89□□□□□ -1.47
RAB40C-207ENST00000563109 LCE1DQ5T752 114 aa5.87□□□□□ -1.47
RAB40C-207ENST00000563109 KRTAP12-4P60329 112 aa5.75□□□□□ -1.49
RAB40C-207ENST00000563109 MT1AP04731 61 aa5.74□□□□□ -1.49
RAB40C-207ENST00000563109 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
RAB40C-207ENST00000563109 SPRR5A0A1B0GTR4 108 aa5.72□□□□□ -1.49
RAB40C-207ENST00000563109 HMCN1Q96RW7 5635 aa5.71□□□□□ -1.49
RAB40C-207ENST00000563109 KRTAP6-1Q3LI64 71 aa5.65□□□□□ -1.5
RAB40C-207ENST00000563109 KRTAP20-2Q3LI61 65 aa5.62□□□□□ -1.51
RAB40C-207ENST00000563109 SYNE1Q8NF91 8797 aaKnown RBP5.61□□□□□ -1.51
RAB40C-207ENST00000563109 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
RAB40C-207ENST00000563109 LUZP6Q538Z0 58 aa5.42□□□□□ -1.54
RAB40C-207ENST00000563109 KRTAP5-3Q6L8H2 238 aa5.41□□□□□ -1.54
RAB40C-207ENST00000563109 NDUFAF8A1L188 74 aa5.36□□□□□ -1.55
RAB40C-207ENST00000563109 AHNAK2Q8IVF2 5795 aa5.35□□□□□ -1.55
RAB40C-207ENST00000563109 GPR98Q8WXG9 6306 aa5.32□□□□□ -1.56
RAB40C-207ENST00000563109 KRTAP6-2Q3LI66 62 aa5.32□□□□□ -1.56
RAB40C-207ENST00000563109 KRTAP5-2Q701N4 177 aa5.32□□□□□ -1.56
RAB40C-207ENST00000563109 MT3P25713 68 aa5.24□□□□□ -1.57
RAB40C-207ENST00000563109 KRTAP5-10Q6L8G5 202 aa5.18□□□□□ -1.58
RAB40C-207ENST00000563109 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
RAB40C-207ENST00000563109 KRTAP5-7Q6L8G8 165 aa4.92□□□□□ -1.62
RAB40C-207ENST00000563109 KRTAP5-8O75690 187 aa4.8□□□□□ -1.64
RAB40C-207ENST00000563109 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
RAB40C-207ENST00000563109 H3BS24 57 aa4.73□□□□□ -1.65
RAB40C-207ENST00000563109 A0A0A0MQY5 61 aa4.69□□□□□ -1.66
RAB40C-207ENST00000563109 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
RAB40C-207ENST00000563109 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
RAB40C-207ENST00000563109 KRTAP5-1Q6L8H4 278 aa4.66□□□□□ -1.66
RAB40C-207ENST00000563109 MUC5ACP98088 5654 aa4.53□□□□□ -1.68
RAB40C-207ENST00000563109 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
RAB40C-207ENST00000563109 LCE3EQ5T5B0 92 aa4.48□□□□□ -1.69
RAB40C-207ENST00000563109 INE1O15225 51 aa4.44□□□□□ -1.7
RAB40C-207ENST00000563109 LCE1BQ5T7P3 118 aa4.39□□□□□ -1.71
RAB40C-207ENST00000563109 KRTAP4-2Q9BYR5 136 aa4.35□□□□□ -1.71
RAB40C-207ENST00000563109 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
RAB40C-207ENST00000563109 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
RAB40C-207ENST00000563109 AHNAKQ09666 5890 aaKnown RBP4.26□□□□□ -1.73
RAB40C-207ENST00000563109 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
RAB40C-207ENST00000563109 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
RAB40C-207ENST00000563109 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
RAB40C-207ENST00000563109 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
RAB40C-207ENST00000563109 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
RAB40C-207ENST00000563109 PRM1P04553 51 aa3.65□□□□□ -1.83
RAB40C-207ENST00000563109 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
RAB40C-207ENST00000563109 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
RAB40C-207ENST00000563109 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
RAB40C-207ENST00000563109 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
RAB40C-207ENST00000563109 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 105.3 ms