RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 M0QZ58 72 aa1.88□□□□□ -2.11
SMG1-206ENST00000562668 MT1XP80297 61 aa1.88□□□□□ -2.11
SMG1-206ENST00000562668 R4GN34 69 aa1.88□□□□□ -2.11
SMG1-206ENST00000562668 KMT2DO14686 5537 aa1.87□□□□□ -2.11
SMG1-206ENST00000562668 ATP5EP56381 51 aaPredicted RBP1.86□□□□□ -2.11
SMG1-206ENST00000562668 TMEM258P61165 79 aa1.86□□□□□ -2.11
SMG1-206ENST00000562668 MUC12Q9UKN1 5478 aa1.85□□□□□ -2.11
SMG1-206ENST00000562668 A6NN06 94 aa1.85□□□□□ -2.11
SMG1-206ENST00000562668 A0A1B0GU33 70 aa1.82□□□□□ -2.12
SMG1-206ENST00000562668 LINC01554Q52M75 96 aa1.82□□□□□ -2.12
SMG1-206ENST00000562668 PLAC4Q8WY50 150 aa1.82□□□□□ -2.12
SMG1-206ENST00000562668 LINC01558Q9Y6Z2 57 aa1.82□□□□□ -2.12
SMG1-206ENST00000562668 KRTAP6-3Q3LI67 103 aa1.81□□□□□ -2.12
SMG1-206ENST00000562668 SPATA8Q6RVD6 105 aa1.81□□□□□ -2.12
SMG1-206ENST00000562668 NEBP20929 6669 aa1.8□□□□□ -2.12
SMG1-206ENST00000562668 A0A1B0GU69 56 aa1.8□□□□□ -2.12
SMG1-206ENST00000562668 SERP1Q9Y6X1 66 aa1.8□□□□□ -2.12
SMG1-206ENST00000562668 KRTAP12-1P59990 96 aa1.79□□□□□ -2.12
SMG1-206ENST00000562668 SEC61GP60059 68 aa1.79□□□□□ -2.12
SMG1-206ENST00000562668 PRO2289Q9P1D8 64 aa1.79□□□□□ -2.12
SMG1-206ENST00000562668 MDN1Q9NU22 5596 aa1.78□□□□□ -2.12
SMG1-206ENST00000562668 A0A0D9SG42 100 aa1.77□□□□□ -2.13
SMG1-206ENST00000562668 Q1T7F1 81 aa1.75□□□□□ -2.13
SMG1-206ENST00000562668 SMIM26A0A096LP01 95 aa1.74□□□□□ -2.13
SMG1-206ENST00000562668 RPS28P62857 69 aaKnown RBP1.74□□□□□ -2.13
SMG1-206ENST00000562668 PRR15LQ9BU68 103 aa1.74□□□□□ -2.13
SMG1-206ENST00000562668 SPINT4Q6UDR6 99 aa1.73□□□□□ -2.13
SMG1-206ENST00000562668 C10orf95Q9H7T3 257 aa1.72□□□□□ -2.13
SMG1-206ENST00000562668 UQCR11O14957 56 aa1.71□□□□□ -2.14
SMG1-206ENST00000562668 PSPHP1O15172 72 aa1.71□□□□□ -2.14
SMG1-206ENST00000562668 KRTAP8-1Q8IUC2 63 aa1.71□□□□□ -2.14
SMG1-206ENST00000562668 V9GYY9 64 aa1.71□□□□□ -2.14
SMG1-206ENST00000562668 SPRR2FQ96RM1 72 aa1.7□□□□□ -2.14
SMG1-206ENST00000562668 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
SMG1-206ENST00000562668 KRTAP19-7Q3SYF9 63 aa1.69□□□□□ -2.14
SMG1-206ENST00000562668 MT1EP04732 61 aa1.65□□□□□ -2.15
SMG1-206ENST00000562668 SPRR2EP22531 72 aa1.65□□□□□ -2.15
SMG1-206ENST00000562668 SPRR2BP35325 72 aa1.65□□□□□ -2.15
SMG1-206ENST00000562668 SPRR2AP35326 72 aa1.65□□□□□ -2.15
SMG1-206ENST00000562668 KRTAP19-5Q3LI72 72 aa1.64□□□□□ -2.15
SMG1-206ENST00000562668 A6NED7 52 aa1.63□□□□□ -2.15
SMG1-206ENST00000562668 TNP1P09430 55 aa1.63□□□□□ -2.15
SMG1-206ENST00000562668 KRTAP19-3Q7Z4W3 81 aa1.61□□□□□ -2.15
SMG1-206ENST00000562668 CDC42SE1Q9NRR8 79 aa1.61□□□□□ -2.15
SMG1-206ENST00000562668 KRTAP2-3P0C7H8 128 aa1.6□□□□□ -2.15
SMG1-206ENST00000562668 KRTAP20-1Q3LI63 56 aa1.6□□□□□ -2.15
SMG1-206ENST00000562668 KRTAP2-4Q9BYR9 128 aa1.6□□□□□ -2.15
SMG1-206ENST00000562668 SPRR2DP22532 72 aa1.59□□□□□ -2.15
SMG1-206ENST00000562668 KRTAP25-1Q3LHN0 102 aa1.59□□□□□ -2.15
SMG1-206ENST00000562668 MT1LQ93083 61 aa1.59□□□□□ -2.15
SMG1-206ENST00000562668 K7ERS5 55 aa1.58□□□□□ -2.16
SMG1-206ENST00000562668 MT1GP13640 62 aa1.57□□□□□ -2.16
SMG1-206ENST00000562668 MT1MQ8N339 61 aa1.57□□□□□ -2.16
SMG1-206ENST00000562668 DSTQ03001 7570 aaKnown RBP1.56□□□□□ -2.16
SMG1-206ENST00000562668 ROMO1P60602 79 aa1.55□□□□□ -2.16
SMG1-206ENST00000562668 KRTAP2-1Q9BYU5 128 aa1.55□□□□□ -2.16
SMG1-206ENST00000562668 BRK1Q8WUW1 75 aa1.49□□□□□ -2.17
SMG1-206ENST00000562668 LUZP6Q538Z0 58 aa1.46□□□□□ -2.18
SMG1-206ENST00000562668 SYNE1Q8NF91 8797 aaKnown RBP1.42□□□□□ -2.18
SMG1-206ENST00000562668 PMAIP1Q13794 54 aa1.4□□□□□ -2.19
SMG1-206ENST00000562668 MT4P47944 62 aa1.39□□□□□ -2.19
SMG1-206ENST00000562668 PRO0628Q9UI54 55 aa1.39□□□□□ -2.19
SMG1-206ENST00000562668 AHNAK2Q8IVF2 5795 aa1.37□□□□□ -2.19
SMG1-206ENST00000562668 GPR98Q8WXG9 6306 aa1.36□□□□□ -2.19
SMG1-206ENST00000562668 KRTAP20-2Q3LI61 65 aa1.36□□□□□ -2.19
SMG1-206ENST00000562668 MT1AP04731 61 aa1.35□□□□□ -2.19
SMG1-206ENST00000562668 KRTAP6-1Q3LI64 71 aa1.35□□□□□ -2.19
SMG1-206ENST00000562668 KTN1-AS1Q86SY8 53 aa1.31□□□□□ -2.2
SMG1-206ENST00000562668 KRTAP5-10Q6L8G5 202 aa1.29□□□□□ -2.2
SMG1-206ENST00000562668 KRTAP6-2Q3LI66 62 aa1.25□□□□□ -2.21
SMG1-206ENST00000562668 MUC5ACP98088 5654 aa1.19□□□□□ -2.22
SMG1-206ENST00000562668 MUC5BQ9HC84 5762 aaPredicted RBP1.12□□□□□ -2.23
SMG1-206ENST00000562668 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
SMG1-206ENST00000562668 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
SMG1-206ENST00000562668 PRM1P04553 51 aa0.81□□□□□ -2.28
SMG1-206ENST00000562668 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
SMG1-206ENST00000562668 INE1O15225 51 aa0.79□□□□□ -2.28
SMG1-206ENST00000562668 KRTAP21-1Q3LI58 79 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 240.7 ms