RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
LPCAT4-202ENST00000562404 TMEM258P61165 79 aa3.89□□□□□ -1.79
LPCAT4-202ENST00000562404 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
LPCAT4-202ENST00000562404 KRTAP4-12Q9BQ66 201 aa3.89□□□□□ -1.79
LPCAT4-202ENST00000562404 PCP4P48539 62 aa3.84□□□□□ -1.79
LPCAT4-202ENST00000562404 LCE1DQ5T752 114 aa3.84□□□□□ -1.79
LPCAT4-202ENST00000562404 UQCR11O14957 56 aa3.83□□□□□ -1.8
LPCAT4-202ENST00000562404 KRTAP4-7Q9BYR0 210 aa3.82□□□□□ -1.8
LPCAT4-202ENST00000562404 H3BS24 57 aa3.79□□□□□ -1.8
LPCAT4-202ENST00000562404 MT4P47944 62 aa3.79□□□□□ -1.8
LPCAT4-202ENST00000562404 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
LPCAT4-202ENST00000562404 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
LPCAT4-202ENST00000562404 LCE4AQ5TA78 99 aa3.78□□□□□ -1.8
LPCAT4-202ENST00000562404 MIR22HGQ0VDD5 57 aa3.76□□□□□ -1.81
LPCAT4-202ENST00000562404 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
LPCAT4-202ENST00000562404 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
LPCAT4-202ENST00000562404 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
LPCAT4-202ENST00000562404 PSPHP1O15172 72 aa3.71□□□□□ -1.82
LPCAT4-202ENST00000562404 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
LPCAT4-202ENST00000562404 V9GYY9 64 aa3.69□□□□□ -1.82
LPCAT4-202ENST00000562404 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
LPCAT4-202ENST00000562404 Q1T7F1 81 aa3.67□□□□□ -1.82
LPCAT4-202ENST00000562404 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
LPCAT4-202ENST00000562404 K7ERS5 55 aa3.61□□□□□ -1.83
LPCAT4-202ENST00000562404 KRTAP5-10Q6L8G5 202 aa3.57□□□□□ -1.84
LPCAT4-202ENST00000562404 RPS28P62857 69 aaKnown RBP3.56□□□□□ -1.84
LPCAT4-202ENST00000562404 A6NED7 52 aa3.55□□□□□ -1.84
LPCAT4-202ENST00000562404 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
LPCAT4-202ENST00000562404 KRTAP19-4Q3LI73 84 aa3.55□□□□□ -1.84
LPCAT4-202ENST00000562404 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
LPCAT4-202ENST00000562404 KRTAP15-1Q3LI76 137 aa3.53□□□□□ -1.84
LPCAT4-202ENST00000562404 SYNE1Q8NF91 8797 aaKnown RBP3.52□□□□□ -1.85
LPCAT4-202ENST00000562404 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
LPCAT4-202ENST00000562404 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
LPCAT4-202ENST00000562404 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
LPCAT4-202ENST00000562404 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
LPCAT4-202ENST00000562404 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
LPCAT4-202ENST00000562404 CDC42SE1Q9NRR8 79 aa3.46□□□□□ -1.86
LPCAT4-202ENST00000562404 ROMO1P60602 79 aa3.43□□□□□ -1.86
LPCAT4-202ENST00000562404 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
LPCAT4-202ENST00000562404 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
LPCAT4-202ENST00000562404 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
LPCAT4-202ENST00000562404 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
LPCAT4-202ENST00000562404 MT1AP04731 61 aa3.35□□□□□ -1.87
LPCAT4-202ENST00000562404 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
LPCAT4-202ENST00000562404 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
LPCAT4-202ENST00000562404 KRTAP6-2Q3LI66 62 aa3.2□□□□□ -1.9
LPCAT4-202ENST00000562404 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
LPCAT4-202ENST00000562404 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
LPCAT4-202ENST00000562404 BRK1Q8WUW1 75 aa3.13□□□□□ -1.91
LPCAT4-202ENST00000562404 PRO0628Q9UI54 55 aa3.11□□□□□ -1.91
LPCAT4-202ENST00000562404 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
LPCAT4-202ENST00000562404 MT3P25713 68 aa3.04□□□□□ -1.92
LPCAT4-202ENST00000562404 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
LPCAT4-202ENST00000562404 PMAIP1Q13794 54 aa2.97□□□□□ -1.93
LPCAT4-202ENST00000562404 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
LPCAT4-202ENST00000562404 KTN1-AS1Q86SY8 53 aa2.88□□□□□ -1.95
LPCAT4-202ENST00000562404 SVIPQ8NHG7 77 aa2.88□□□□□ -1.95
LPCAT4-202ENST00000562404 PRAC1Q96KF2 57 aa2.81□□□□□ -1.96
LPCAT4-202ENST00000562404 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
LPCAT4-202ENST00000562404 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
LPCAT4-202ENST00000562404 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
LPCAT4-202ENST00000562404 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
LPCAT4-202ENST00000562404 LUZP6Q538Z0 58 aa2.42□□□□□ -2.02
LPCAT4-202ENST00000562404 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
LPCAT4-202ENST00000562404 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
LPCAT4-202ENST00000562404 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
LPCAT4-202ENST00000562404 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
LPCAT4-202ENST00000562404 A0A0A0MQY5 61 aa2.22□□□□□ -2.05
LPCAT4-202ENST00000562404 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
LPCAT4-202ENST00000562404 NDUFAF8A1L188 74 aa2.18□□□□□ -2.06
LPCAT4-202ENST00000562404 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
LPCAT4-202ENST00000562404 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
LPCAT4-202ENST00000562404 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
LPCAT4-202ENST00000562404 INE1O15225 51 aa1.88□□□□□ -2.11
LPCAT4-202ENST00000562404 PRM1P04553 51 aa1.78□□□□□ -2.12
LPCAT4-202ENST00000562404 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
LPCAT4-202ENST00000562404 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 128.2 ms