RNA–Protein interactions for RNA: ENST00000562271.1

LINC01225-201, Transcript of LINC01225 pseudogene, humanhuman

Gene LINC01225, Length 2,270 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01225-201ENST00000562271 MDN1Q9NU22 5596 aa6.35□□□□□ -1.39
LINC01225-201ENST00000562271 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
LINC01225-201ENST00000562271 KRTAP19-7Q3SYF9 63 aa6.26□□□□□ -1.41
LINC01225-201ENST00000562271 SPRR2FQ96RM1 72 aa6.25□□□□□ -1.41
LINC01225-201ENST00000562271 KRTAP9-7A8MTY7 169 aa6.19□□□□□ -1.42
LINC01225-201ENST00000562271 MT1EP04732 61 aa6.12□□□□□ -1.43
LINC01225-201ENST00000562271 KRTAP5-9P26371 169 aa6.11□□□□□ -1.43
LINC01225-201ENST00000562271 DSTQ03001 7570 aaKnown RBP6.11□□□□□ -1.43
LINC01225-201ENST00000562271 KRTAP6-3Q3LI67 103 aa6.09□□□□□ -1.43
LINC01225-201ENST00000562271 KRTAP9-6A8MVA2 160 aa6.05□□□□□ -1.44
LINC01225-201ENST00000562271 KRTAP19-4Q3LI73 84 aa6□□□□□ -1.45
LINC01225-201ENST00000562271 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
LINC01225-201ENST00000562271 LCE1AQ5T7P2 110 aa5.97□□□□□ -1.45
LINC01225-201ENST00000562271 SPRR2EP22531 72 aa5.96□□□□□ -1.45
LINC01225-201ENST00000562271 SPRR2BP35325 72 aa5.96□□□□□ -1.45
LINC01225-201ENST00000562271 SPRR2AP35326 72 aa5.96□□□□□ -1.45
LINC01225-201ENST00000562271 MT1LQ93083 61 aa5.96□□□□□ -1.45
LINC01225-201ENST00000562271 NEBP20929 6669 aa5.95□□□□□ -1.46
LINC01225-201ENST00000562271 KRTAP2-3P0C7H8 128 aa5.91□□□□□ -1.46
LINC01225-201ENST00000562271 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
LINC01225-201ENST00000562271 KRTAP2-4Q9BYR9 128 aa5.91□□□□□ -1.46
LINC01225-201ENST00000562271 KRTAP2-1Q9BYU5 128 aa5.91□□□□□ -1.46
LINC01225-201ENST00000562271 KRTAP19-3Q7Z4W3 81 aa5.89□□□□□ -1.47
LINC01225-201ENST00000562271 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
LINC01225-201ENST00000562271 MT1MQ8N339 61 aa5.78□□□□□ -1.48
LINC01225-201ENST00000562271 MT1GP13640 62 aa5.74□□□□□ -1.49
LINC01225-201ENST00000562271 SPRR2DP22532 72 aa5.72□□□□□ -1.49
LINC01225-201ENST00000562271 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
LINC01225-201ENST00000562271 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
LINC01225-201ENST00000562271 KRTAP20-1Q3LI63 56 aa5.4□□□□□ -1.54
LINC01225-201ENST00000562271 KRTAP12-4P60329 112 aa5.31□□□□□ -1.56
LINC01225-201ENST00000562271 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
LINC01225-201ENST00000562271 KRTAP2-2Q9BYT5 123 aa5.25□□□□□ -1.57
LINC01225-201ENST00000562271 KRTAP5-5Q701N2 237 aaPredicted RBP5.21□□□□□ -1.58
LINC01225-201ENST00000562271 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
LINC01225-201ENST00000562271 MT4P47944 62 aa5.12□□□□□ -1.59
LINC01225-201ENST00000562271 KRTAP6-1Q3LI64 71 aa5.11□□□□□ -1.59
LINC01225-201ENST00000562271 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
LINC01225-201ENST00000562271 HMCN1Q96RW7 5635 aa5.05□□□□□ -1.6
LINC01225-201ENST00000562271 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
LINC01225-201ENST00000562271 MT1AP04731 61 aa5.01□□□□□ -1.61
LINC01225-201ENST00000562271 LCE1DQ5T752 114 aa5□□□□□ -1.61
LINC01225-201ENST00000562271 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
LINC01225-201ENST00000562271 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
LINC01225-201ENST00000562271 LCE3DQ9BYE3 92 aa4.86□□□□□ -1.63
LINC01225-201ENST00000562271 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
LINC01225-201ENST00000562271 KRTAP20-2Q3LI61 65 aa4.8□□□□□ -1.64
LINC01225-201ENST00000562271 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
LINC01225-201ENST00000562271 PRM1P04553 51 aa4.75□□□□□ -1.65
LINC01225-201ENST00000562271 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
LINC01225-201ENST00000562271 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
LINC01225-201ENST00000562271 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
LINC01225-201ENST00000562271 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
LINC01225-201ENST00000562271 MT3P25713 68 aa4.5□□□□□ -1.69
LINC01225-201ENST00000562271 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
LINC01225-201ENST00000562271 KRTAP5-10Q6L8G5 202 aa4.24□□□□□ -1.73
LINC01225-201ENST00000562271 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
LINC01225-201ENST00000562271 KRTAP5-8O75690 187 aa4.09□□□□□ -1.76
LINC01225-201ENST00000562271 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
LINC01225-201ENST00000562271 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
LINC01225-201ENST00000562271 MUC5ACP98088 5654 aa4.01□□□□□ -1.77
LINC01225-201ENST00000562271 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
LINC01225-201ENST00000562271 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
LINC01225-201ENST00000562271 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
LINC01225-201ENST00000562271 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
LINC01225-201ENST00000562271 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
LINC01225-201ENST00000562271 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
LINC01225-201ENST00000562271 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
LINC01225-201ENST00000562271 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
LINC01225-201ENST00000562271 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
LINC01225-201ENST00000562271 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
LINC01225-201ENST00000562271 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
LINC01225-201ENST00000562271 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
LINC01225-201ENST00000562271 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
LINC01225-201ENST00000562271 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
LINC01225-201ENST00000562271 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
LINC01225-201ENST00000562271 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
LINC01225-201ENST00000562271 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 59.2 ms