RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 SPRR2AP35326 72 aa8.43□□□□□ -1.06
SYNGR3-202ENST00000562045 LCE1AQ5T7P2 110 aa8.41□□□□□ -1.06
SYNGR3-202ENST00000562045 KRTAP19-7Q3SYF9 63 aa8.37□□□□□ -1.07
SYNGR3-202ENST00000562045 KRTAP19-5Q3LI72 72 aa8.33□□□□□ -1.08
SYNGR3-202ENST00000562045 KRTAP12-3P60328 96 aa8.32□□□□□ -1.08
SYNGR3-202ENST00000562045 NDUFAF8A1L188 74 aa8.31□□□□□ -1.08
SYNGR3-202ENST00000562045 MT1EP04732 61 aa8.25□□□□□ -1.09
SYNGR3-202ENST00000562045 KRTAP20-1Q3LI63 56 aa8.15□□□□□ -1.1
SYNGR3-202ENST00000562045 SPRR2DP22532 72 aa8.14□□□□□ -1.11
SYNGR3-202ENST00000562045 KRTAP19-3Q7Z4W3 81 aa8.06□□□□□ -1.12
SYNGR3-202ENST00000562045 LCE5AQ5TCM9 118 aa8.05□□□□□ -1.12
SYNGR3-202ENST00000562045 KRTAP2-3P0C7H8 128 aa8.04□□□□□ -1.12
SYNGR3-202ENST00000562045 KRTAP2-4Q9BYR9 128 aa8.04□□□□□ -1.12
SYNGR3-202ENST00000562045 MT1LQ93083 61 aa7.96□□□□□ -1.14
SYNGR3-202ENST00000562045 DSTQ03001 7570 aaKnown RBP7.9□□□□□ -1.14
SYNGR3-202ENST00000562045 A0A0A0MQY5 61 aa7.9□□□□□ -1.14
SYNGR3-202ENST00000562045 MT1GP13640 62 aa7.89□□□□□ -1.15
SYNGR3-202ENST00000562045 LCE3BQ5TA77 95 aa7.89□□□□□ -1.15
SYNGR3-202ENST00000562045 KRTAP19-4Q3LI73 84 aa7.86□□□□□ -1.15
SYNGR3-202ENST00000562045 MT1MQ8N339 61 aa7.83□□□□□ -1.16
SYNGR3-202ENST00000562045 KRTAP2-2Q9BYT5 123 aa7.82□□□□□ -1.16
SYNGR3-202ENST00000562045 KRTAP2-1Q9BYU5 128 aa7.82□□□□□ -1.16
SYNGR3-202ENST00000562045 LUZP6Q538Z0 58 aa7.75□□□□□ -1.17
SYNGR3-202ENST00000562045 LCE3CQ5T5A8 94 aa7.75□□□□□ -1.17
SYNGR3-202ENST00000562045 KRTAP4-3Q9BYR4 195 aa7.72□□□□□ -1.17
SYNGR3-202ENST00000562045 SPRR5A0A1B0GTR4 108 aa7.7□□□□□ -1.18
SYNGR3-202ENST00000562045 KRTAP4-7Q9BYR0 210 aa7.69□□□□□ -1.18
SYNGR3-202ENST00000562045 KRTAP4-9Q9BYQ8 210 aa7.29□□□□□ -1.24
SYNGR3-202ENST00000562045 KRTAP9-6A8MVA2 160 aa7.28□□□□□ -1.24
SYNGR3-202ENST00000562045 LOC100996750A0A140TA64 210 aa7.26□□□□□ -1.25
SYNGR3-202ENST00000562045 KRTAP5-4Q6L8H1 288 aa7.19□□□□□ -1.26
SYNGR3-202ENST00000562045 LCE4AQ5TA78 99 aa7.18□□□□□ -1.26
SYNGR3-202ENST00000562045 KRTAP5-5Q701N2 237 aaPredicted RBP7.15□□□□□ -1.27
SYNGR3-202ENST00000562045 LCE1DQ5T752 114 aa7.14□□□□□ -1.27
SYNGR3-202ENST00000562045 MT4P47944 62 aa7.13□□□□□ -1.27
SYNGR3-202ENST00000562045 HMCN1Q96RW7 5635 aa7.05□□□□□ -1.28
SYNGR3-202ENST00000562045 KRTAP4-6Q9BYQ5 205 aa7.01□□□□□ -1.29
SYNGR3-202ENST00000562045 INE1O15225 51 aa6.93□□□□□ -1.3
SYNGR3-202ENST00000562045 SYNE1Q8NF91 8797 aaKnown RBP6.88□□□□□ -1.31
SYNGR3-202ENST00000562045 MT1AP04731 61 aa6.78□□□□□ -1.32
SYNGR3-202ENST00000562045 KRTAP20-2Q3LI61 65 aa6.76□□□□□ -1.33
SYNGR3-202ENST00000562045 KRTAP12-4P60329 112 aa6.75□□□□□ -1.33
SYNGR3-202ENST00000562045 KRTAP6-1Q3LI64 71 aa6.74□□□□□ -1.33
SYNGR3-202ENST00000562045 GPR98Q8WXG9 6306 aa6.66□□□□□ -1.34
SYNGR3-202ENST00000562045 AHNAK2Q8IVF2 5795 aa6.63□□□□□ -1.35
SYNGR3-202ENST00000562045 KRTAP5-3Q6L8H2 238 aa6.56□□□□□ -1.36
SYNGR3-202ENST00000562045 KRTAP9-4Q9BYQ2 154 aa6.48□□□□□ -1.37
SYNGR3-202ENST00000562045 KRTAP5-10Q6L8G5 202 aa6.39□□□□□ -1.39
SYNGR3-202ENST00000562045 KRTAP5-2Q701N4 177 aa6.38□□□□□ -1.39
SYNGR3-202ENST00000562045 KRTAP6-2Q3LI66 62 aa6.34□□□□□ -1.39
SYNGR3-202ENST00000562045 MT3P25713 68 aa6.16□□□□□ -1.42
SYNGR3-202ENST00000562045 OBSCNQ5VST9 7968 aa6.07□□□□□ -1.44
SYNGR3-202ENST00000562045 KRTAP4-11Q9BYQ6 195 aa6.05□□□□□ -1.44
SYNGR3-202ENST00000562045 KRTAP5-7Q6L8G8 165 aa6.05□□□□□ -1.44
SYNGR3-202ENST00000562045 KRTAP5-8O75690 187 aa5.87□□□□□ -1.47
SYNGR3-202ENST00000562045 LCE3DQ9BYE3 92 aa5.79□□□□□ -1.48
SYNGR3-202ENST00000562045 KRTAP5-1Q6L8H4 278 aa5.66□□□□□ -1.5
SYNGR3-202ENST00000562045 LCE3EQ5T5B0 92 aa5.6□□□□□ -1.51
SYNGR3-202ENST00000562045 MUC5ACP98088 5654 aa5.52□□□□□ -1.53
SYNGR3-202ENST00000562045 LCE1EQ5T753 118 aa5.5□□□□□ -1.53
SYNGR3-202ENST00000562045 KRTAP9-9Q9BYP9 154 aa5.41□□□□□ -1.54
SYNGR3-202ENST00000562045 MUC5BQ9HC84 5762 aaPredicted RBP5.39□□□□□ -1.55
SYNGR3-202ENST00000562045 AHNAKQ09666 5890 aaKnown RBP5.27□□□□□ -1.57
SYNGR3-202ENST00000562045 KRTAP4-2Q9BYR5 136 aa5.24□□□□□ -1.57
SYNGR3-202ENST00000562045 LCE1BQ5T7P3 118 aa5.21□□□□□ -1.58
SYNGR3-202ENST00000562045 LCE1CQ5T751 118 aa5.13□□□□□ -1.59
SYNGR3-202ENST00000562045 PRM1P04553 51 aa4.83□□□□□ -1.64
SYNGR3-202ENST00000562045 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.72□□□□□ -1.65
SYNGR3-202ENST00000562045 KRTAP4-12Q9BQ66 201 aa4.62□□□□□ -1.67
SYNGR3-202ENST00000562045 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
SYNGR3-202ENST00000562045 KRTAP21-2Q3LI59 83 aa4.43□□□□□ -1.7
SYNGR3-202ENST00000562045 LCE1FQ5T754 118 aa4.4□□□□□ -1.71
SYNGR3-202ENST00000562045 KRTAP4-4Q9BYR3 166 aa4.04□□□□□ -1.76
SYNGR3-202ENST00000562045 PHGR1C9JFL3 82 aa3.98□□□□□ -1.77
SYNGR3-202ENST00000562045 MUC19Q7Z5P9 8384 aa3.69□□□□□ -1.82
SYNGR3-202ENST00000562045 KRTAP21-1Q3LI58 79 aa3.19□□□□□ -1.9
SYNGR3-202ENST00000562045 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 85.1 ms