RNA–Protein interactions for RNA: ENST00000561879.1

VAC14-203, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 2

Gene VAC14, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-203ENST00000561879 ROMO1P60602 79 aa4.35□□□□□ -1.71
VAC14-203ENST00000561879 KRTAP19-6Q3LI70 58 aa4.34□□□□□ -1.71
VAC14-203ENST00000561879 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.71
VAC14-203ENST00000561879 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
VAC14-203ENST00000561879 SSPOA2VEC9 5147 aa4.26□□□□□ -1.73
VAC14-203ENST00000561879 TNP1P09430 55 aa4.25□□□□□ -1.73
VAC14-203ENST00000561879 KTN1-AS1Q86SY8 53 aa4.19□□□□□ -1.74
VAC14-203ENST00000561879 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
VAC14-203ENST00000561879 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
VAC14-203ENST00000561879 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
VAC14-203ENST00000561879 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
VAC14-203ENST00000561879 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
VAC14-203ENST00000561879 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
VAC14-203ENST00000561879 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
VAC14-203ENST00000561879 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
VAC14-203ENST00000561879 SYNE2Q8WXH0 6885 aaKnown RBP3.94□□□□□ -1.78
VAC14-203ENST00000561879 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
VAC14-203ENST00000561879 KRTAP12-3P60328 96 aa3.92□□□□□ -1.78
VAC14-203ENST00000561879 KRTAP19-5Q3LI72 72 aa3.9□□□□□ -1.79
VAC14-203ENST00000561879 KRTAP19-7Q3SYF9 63 aa3.9□□□□□ -1.79
VAC14-203ENST00000561879 KMT2DO14686 5537 aa3.9□□□□□ -1.79
VAC14-203ENST00000561879 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
VAC14-203ENST00000561879 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
VAC14-203ENST00000561879 KRTAP5-9P26371 169 aa3.84□□□□□ -1.79
VAC14-203ENST00000561879 MT1EP04732 61 aa3.83□□□□□ -1.8
VAC14-203ENST00000561879 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
VAC14-203ENST00000561879 SPRR2FQ96RM1 72 aa3.79□□□□□ -1.8
VAC14-203ENST00000561879 MT1LQ93083 61 aa3.74□□□□□ -1.81
VAC14-203ENST00000561879 MUC12Q9UKN1 5478 aa3.71□□□□□ -1.82
VAC14-203ENST00000561879 KRTAP19-3Q7Z4W3 81 aa3.71□□□□□ -1.82
VAC14-203ENST00000561879 MT1GP13640 62 aa3.7□□□□□ -1.82
VAC14-203ENST00000561879 NEBP20929 6669 aa3.68□□□□□ -1.82
VAC14-203ENST00000561879 SPRR2EP22531 72 aa3.63□□□□□ -1.83
VAC14-203ENST00000561879 SPRR2BP35325 72 aa3.63□□□□□ -1.83
VAC14-203ENST00000561879 SPRR2AP35326 72 aa3.63□□□□□ -1.83
VAC14-203ENST00000561879 MT1MQ8N339 61 aa3.61□□□□□ -1.83
VAC14-203ENST00000561879 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
VAC14-203ENST00000561879 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
VAC14-203ENST00000561879 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
VAC14-203ENST00000561879 LUZP6Q538Z0 58 aa3.55□□□□□ -1.84
VAC14-203ENST00000561879 SPRR2DP22532 72 aa3.5□□□□□ -1.85
VAC14-203ENST00000561879 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
VAC14-203ENST00000561879 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
VAC14-203ENST00000561879 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
VAC14-203ENST00000561879 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
VAC14-203ENST00000561879 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
VAC14-203ENST00000561879 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
VAC14-203ENST00000561879 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
VAC14-203ENST00000561879 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
VAC14-203ENST00000561879 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
VAC14-203ENST00000561879 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
VAC14-203ENST00000561879 MT1AP04731 61 aa3.19□□□□□ -1.9
VAC14-203ENST00000561879 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
VAC14-203ENST00000561879 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
VAC14-203ENST00000561879 KRTAP12-4P60329 112 aa3.09□□□□□ -1.91
VAC14-203ENST00000561879 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
VAC14-203ENST00000561879 MT4P47944 62 aa3.01□□□□□ -1.93
VAC14-203ENST00000561879 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
VAC14-203ENST00000561879 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
VAC14-203ENST00000561879 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
VAC14-203ENST00000561879 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
VAC14-203ENST00000561879 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
VAC14-203ENST00000561879 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
VAC14-203ENST00000561879 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
VAC14-203ENST00000561879 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
VAC14-203ENST00000561879 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
VAC14-203ENST00000561879 INE1O15225 51 aa2.72□□□□□ -1.97
VAC14-203ENST00000561879 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
VAC14-203ENST00000561879 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
VAC14-203ENST00000561879 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
VAC14-203ENST00000561879 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
VAC14-203ENST00000561879 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
VAC14-203ENST00000561879 PRM1P04553 51 aa2.23□□□□□ -2.05
VAC14-203ENST00000561879 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
VAC14-203ENST00000561879 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
VAC14-203ENST00000561879 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
VAC14-203ENST00000561879 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
VAC14-203ENST00000561879 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 48.4 ms