RNA–Protein interactions for RNA: ENST00000561840.1

TRAPPC2L-202, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 5 BASIC

Gene TRAPPC2L, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-202ENST00000561840 LCE4AQ5TA78 99 aa4.1□□□□□ -1.75
TRAPPC2L-202ENST00000561840 TMEM258P61165 79 aa4.09□□□□□ -1.75
TRAPPC2L-202ENST00000561840 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
TRAPPC2L-202ENST00000561840 MT4P47944 62 aa4.06□□□□□ -1.76
TRAPPC2L-202ENST00000561840 KRTAP4-3Q9BYR4 195 aa4.04□□□□□ -1.76
TRAPPC2L-202ENST00000561840 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
TRAPPC2L-202ENST00000561840 K7ERS5 55 aa4□□□□□ -1.77
TRAPPC2L-202ENST00000561840 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
TRAPPC2L-202ENST00000561840 KRTAP25-1Q3LHN0 102 aa3.96□□□□□ -1.78
TRAPPC2L-202ENST00000561840 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
TRAPPC2L-202ENST00000561840 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
TRAPPC2L-202ENST00000561840 KRTAP4-7Q9BYR0 210 aa3.94□□□□□ -1.78
TRAPPC2L-202ENST00000561840 V9GYY9 64 aa3.92□□□□□ -1.78
TRAPPC2L-202ENST00000561840 KRTAP4-6Q9BYQ5 205 aa3.91□□□□□ -1.78
TRAPPC2L-202ENST00000561840 PSPHP1O15172 72 aa3.88□□□□□ -1.79
TRAPPC2L-202ENST00000561840 Q1T7F1 81 aa3.85□□□□□ -1.79
TRAPPC2L-202ENST00000561840 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.79
TRAPPC2L-202ENST00000561840 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
TRAPPC2L-202ENST00000561840 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
TRAPPC2L-202ENST00000561840 SVIPQ8NHG7 77 aa3.8□□□□□ -1.8
TRAPPC2L-202ENST00000561840 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
TRAPPC2L-202ENST00000561840 KRTAP5-10Q6L8G5 202 aa3.79□□□□□ -1.8
TRAPPC2L-202ENST00000561840 A6NED7 52 aa3.77□□□□□ -1.81
TRAPPC2L-202ENST00000561840 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
TRAPPC2L-202ENST00000561840 KRTAP15-1Q3LI76 137 aa3.76□□□□□ -1.81
TRAPPC2L-202ENST00000561840 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC2L-202ENST00000561840 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
TRAPPC2L-202ENST00000561840 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
TRAPPC2L-202ENST00000561840 CDC42SE1Q9NRR8 79 aa3.73□□□□□ -1.81
TRAPPC2L-202ENST00000561840 KRTAP5-3Q6L8H2 238 aa3.71□□□□□ -1.82
TRAPPC2L-202ENST00000561840 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
TRAPPC2L-202ENST00000561840 RPS28P62857 69 aaKnown RBP3.66□□□□□ -1.82
TRAPPC2L-202ENST00000561840 KRTAP5-7Q6L8G8 165 aa3.66□□□□□ -1.82
TRAPPC2L-202ENST00000561840 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
TRAPPC2L-202ENST00000561840 ROMO1P60602 79 aa3.65□□□□□ -1.83
TRAPPC2L-202ENST00000561840 MT1AP04731 61 aa3.55□□□□□ -1.84
TRAPPC2L-202ENST00000561840 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
TRAPPC2L-202ENST00000561840 KRTAP4-11Q9BYQ6 195 aa3.46□□□□□ -1.86
TRAPPC2L-202ENST00000561840 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
TRAPPC2L-202ENST00000561840 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
TRAPPC2L-202ENST00000561840 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
TRAPPC2L-202ENST00000561840 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
TRAPPC2L-202ENST00000561840 BRK1Q8WUW1 75 aa3.35□□□□□ -1.87
TRAPPC2L-202ENST00000561840 PRO0628Q9UI54 55 aa3.33□□□□□ -1.88
TRAPPC2L-202ENST00000561840 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
TRAPPC2L-202ENST00000561840 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
TRAPPC2L-202ENST00000561840 MT3P25713 68 aa3.28□□□□□ -1.88
TRAPPC2L-202ENST00000561840 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
TRAPPC2L-202ENST00000561840 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
TRAPPC2L-202ENST00000561840 H3BS24 57 aa3.21□□□□□ -1.9
TRAPPC2L-202ENST00000561840 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC2L-202ENST00000561840 PMAIP1Q13794 54 aa3.15□□□□□ -1.91
TRAPPC2L-202ENST00000561840 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
TRAPPC2L-202ENST00000561840 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
TRAPPC2L-202ENST00000561840 KTN1-AS1Q86SY8 53 aa3.09□□□□□ -1.91
TRAPPC2L-202ENST00000561840 LCE1EQ5T753 118 aa3□□□□□ -1.93
TRAPPC2L-202ENST00000561840 PRAC1Q96KF2 57 aa2.96□□□□□ -1.94
TRAPPC2L-202ENST00000561840 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
TRAPPC2L-202ENST00000561840 A0A0A0MQY5 61 aa2.84□□□□□ -1.95
TRAPPC2L-202ENST00000561840 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
TRAPPC2L-202ENST00000561840 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
TRAPPC2L-202ENST00000561840 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
TRAPPC2L-202ENST00000561840 KRTAP4-12Q9BQ66 201 aa2.65□□□□□ -1.99
TRAPPC2L-202ENST00000561840 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
TRAPPC2L-202ENST00000561840 LUZP6Q538Z0 58 aa2.51□□□□□ -2.01
TRAPPC2L-202ENST00000561840 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
TRAPPC2L-202ENST00000561840 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
TRAPPC2L-202ENST00000561840 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
TRAPPC2L-202ENST00000561840 NDUFAF8A1L188 74 aa2.42□□□□□ -2.02
TRAPPC2L-202ENST00000561840 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
TRAPPC2L-202ENST00000561840 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
TRAPPC2L-202ENST00000561840 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
TRAPPC2L-202ENST00000561840 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
TRAPPC2L-202ENST00000561840 INE1O15225 51 aa1.99□□□□□ -2.09
TRAPPC2L-202ENST00000561840 PRM1P04553 51 aa1.85□□□□□ -2.11
TRAPPC2L-202ENST00000561840 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
TRAPPC2L-202ENST00000561840 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 78.8 ms