RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 KTN1-AS1Q86SY8 53 aa4.8□□□□□ -1.64
COTL1-202ENST00000561707 A0A0A0MQY5 61 aa4.79□□□□□ -1.64
COTL1-202ENST00000561707 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
COTL1-202ENST00000561707 PP632Q6XCG6 107 aa4.77□□□□□ -1.65
COTL1-202ENST00000561707 MDN1Q9NU22 5596 aa4.75□□□□□ -1.65
COTL1-202ENST00000561707 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
COTL1-202ENST00000561707 KRTAP9-9Q9BYP9 154 aa4.73□□□□□ -1.65
COTL1-202ENST00000561707 KRTAP9-4Q9BYQ2 154 aa4.73□□□□□ -1.65
COTL1-202ENST00000561707 KRTAP5-9P26371 169 aa4.72□□□□□ -1.65
COTL1-202ENST00000561707 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
COTL1-202ENST00000561707 KRTAP20-1Q3LI63 56 aa4.72□□□□□ -1.65
COTL1-202ENST00000561707 MT1EP04732 61 aa4.7□□□□□ -1.66
COTL1-202ENST00000561707 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
COTL1-202ENST00000561707 MT1LQ93083 61 aa4.58□□□□□ -1.68
COTL1-202ENST00000561707 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
COTL1-202ENST00000561707 SPRR2EP22531 72 aa4.56□□□□□ -1.68
COTL1-202ENST00000561707 SPRR2BP35325 72 aa4.56□□□□□ -1.68
COTL1-202ENST00000561707 SPRR2AP35326 72 aa4.56□□□□□ -1.68
COTL1-202ENST00000561707 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
COTL1-202ENST00000561707 KRTAP19-3Q7Z4W3 81 aa4.54□□□□□ -1.68
COTL1-202ENST00000561707 KRTAP2-3P0C7H8 128 aa4.52□□□□□ -1.69
COTL1-202ENST00000561707 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
COTL1-202ENST00000561707 KRTAP2-4Q9BYR9 128 aa4.52□□□□□ -1.69
COTL1-202ENST00000561707 MT1GP13640 62 aa4.48□□□□□ -1.69
COTL1-202ENST00000561707 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
COTL1-202ENST00000561707 MT1MQ8N339 61 aa4.45□□□□□ -1.7
COTL1-202ENST00000561707 LCE3CQ5T5A8 94 aa4.41□□□□□ -1.7
COTL1-202ENST00000561707 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
COTL1-202ENST00000561707 SPRR2DP22532 72 aa4.39□□□□□ -1.71
COTL1-202ENST00000561707 KRTAP4-9Q9BYQ8 210 aa4.38□□□□□ -1.71
COTL1-202ENST00000561707 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
COTL1-202ENST00000561707 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
COTL1-202ENST00000561707 GPR98Q8WXG9 6306 aa4.3□□□□□ -1.72
COTL1-202ENST00000561707 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
COTL1-202ENST00000561707 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
COTL1-202ENST00000561707 SPRR5A0A1B0GTR4 108 aa4.18□□□□□ -1.74
COTL1-202ENST00000561707 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
COTL1-202ENST00000561707 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
COTL1-202ENST00000561707 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
COTL1-202ENST00000561707 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
COTL1-202ENST00000561707 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
COTL1-202ENST00000561707 MT1AP04731 61 aa3.89□□□□□ -1.79
COTL1-202ENST00000561707 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
COTL1-202ENST00000561707 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
COTL1-202ENST00000561707 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
COTL1-202ENST00000561707 MT4P47944 62 aa3.84□□□□□ -1.79
COTL1-202ENST00000561707 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
COTL1-202ENST00000561707 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
COTL1-202ENST00000561707 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
COTL1-202ENST00000561707 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
COTL1-202ENST00000561707 KRTAP5-7Q6L8G8 165 aa3.72□□□□□ -1.81
COTL1-202ENST00000561707 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
COTL1-202ENST00000561707 MT3P25713 68 aa3.63□□□□□ -1.83
COTL1-202ENST00000561707 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
COTL1-202ENST00000561707 KRTAP5-3Q6L8H2 238 aa3.58□□□□□ -1.84
COTL1-202ENST00000561707 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
COTL1-202ENST00000561707 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
COTL1-202ENST00000561707 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.88
COTL1-202ENST00000561707 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
COTL1-202ENST00000561707 MUC5ACP98088 5654 aa3.28□□□□□ -1.89
COTL1-202ENST00000561707 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
COTL1-202ENST00000561707 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
COTL1-202ENST00000561707 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
COTL1-202ENST00000561707 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
COTL1-202ENST00000561707 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
COTL1-202ENST00000561707 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
COTL1-202ENST00000561707 INE1O15225 51 aa3.02□□□□□ -1.93
COTL1-202ENST00000561707 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
COTL1-202ENST00000561707 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
COTL1-202ENST00000561707 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
COTL1-202ENST00000561707 PRM1P04553 51 aa2.69□□□□□ -1.98
COTL1-202ENST00000561707 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
COTL1-202ENST00000561707 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
COTL1-202ENST00000561707 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
COTL1-202ENST00000561707 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
COTL1-202ENST00000561707 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
COTL1-202ENST00000561707 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
COTL1-202ENST00000561707 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 99.9 ms