RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 PP632Q6XCG6 107 aa8.92□□□□□ -0.98
NME3-202ENST00000561637 KRTAP4-6Q9BYQ5 205 aa8.91□□□□□ -0.98
NME3-202ENST00000561637 KRTAP4-3Q9BYR4 195 aa8.91□□□□□ -0.98
NME3-202ENST00000561637 KRTAP5-7Q6L8G8 165 aa8.89□□□□□ -0.99
NME3-202ENST00000561637 TNP1P09430 55 aa8.86□□□□□ -0.99
NME3-202ENST00000561637 KRTAP5-4Q6L8H1 288 aa8.86□□□□□ -0.99
NME3-202ENST00000561637 PRR15LQ9BU68 103 aa8.77□□□□□ -1.01
NME3-202ENST00000561637 KRTAP5-3Q6L8H2 238 aa8.76□□□□□ -1.01
NME3-202ENST00000561637 ATP5EP56381 51 aaPredicted RBP8.75□□□□□ -1.01
NME3-202ENST00000561637 LINC01558Q9Y6Z2 57 aa8.75□□□□□ -1.01
NME3-202ENST00000561637 KRTAP4-7Q9BYR0 210 aa8.67□□□□□ -1.02
NME3-202ENST00000561637 KRTAP12-3P60328 96 aa8.59□□□□□ -1.03
NME3-202ENST00000561637 SPRR5A0A1B0GTR4 108 aa8.55□□□□□ -1.04
NME3-202ENST00000561637 UQCR11O14957 56 aa8.51□□□□□ -1.05
NME3-202ENST00000561637 TMEM258P61165 79 aa8.51□□□□□ -1.05
NME3-202ENST00000561637 KRTAP20-2Q3LI61 65 aa8.43□□□□□ -1.06
NME3-202ENST00000561637 MIR22HGQ0VDD5 57 aa8.36□□□□□ -1.07
NME3-202ENST00000561637 KRTAP25-1Q3LHN0 102 aa8.29□□□□□ -1.08
NME3-202ENST00000561637 KRTAP5-5Q701N2 237 aaPredicted RBP8.26□□□□□ -1.09
NME3-202ENST00000561637 LOC100996750A0A140TA64 210 aa8.21□□□□□ -1.1
NME3-202ENST00000561637 PSPHP1O15172 72 aa8.2□□□□□ -1.1
NME3-202ENST00000561637 K7ERS5 55 aa8.1□□□□□ -1.11
NME3-202ENST00000561637 KRTAP12-4P60329 112 aa8.08□□□□□ -1.12
NME3-202ENST00000561637 SYNE1Q8NF91 8797 aaKnown RBP8.04□□□□□ -1.12
NME3-202ENST00000561637 Q1T7F1 81 aa8.03□□□□□ -1.12
NME3-202ENST00000561637 V9GYY9 64 aa8□□□□□ -1.13
NME3-202ENST00000561637 KRTAP15-1Q3LI76 137 aa7.97□□□□□ -1.13
NME3-202ENST00000561637 KRTAP23-1A1A580 65 aa7.91□□□□□ -1.14
NME3-202ENST00000561637 LCE3CQ5T5A8 94 aa7.89□□□□□ -1.15
NME3-202ENST00000561637 KRTAP4-11Q9BYQ6 195 aa7.88□□□□□ -1.15
NME3-202ENST00000561637 KRTAP19-4Q3LI73 84 aa7.87□□□□□ -1.15
NME3-202ENST00000561637 A6NED7 52 aa7.84□□□□□ -1.15
NME3-202ENST00000561637 CDC42SE1Q9NRR8 79 aa7.73□□□□□ -1.17
NME3-202ENST00000561637 MUC5ACP98088 5654 aa7.7□□□□□ -1.18
NME3-202ENST00000561637 KRTAP5-8O75690 187 aa7.68□□□□□ -1.18
NME3-202ENST00000561637 AHNAKQ09666 5890 aaKnown RBP7.68□□□□□ -1.18
NME3-202ENST00000561637 KRTAP6-1Q3LI64 71 aa7.66□□□□□ -1.18
NME3-202ENST00000561637 ROMO1P60602 79 aa7.64□□□□□ -1.19
NME3-202ENST00000561637 MUC5BQ9HC84 5762 aaPredicted RBP7.63□□□□□ -1.19
NME3-202ENST00000561637 MT1AP04731 61 aa7.63□□□□□ -1.19
NME3-202ENST00000561637 KRTAP5-2Q701N4 177 aa7.63□□□□□ -1.19
NME3-202ENST00000561637 KRTAP9-6A8MVA2 160 aa7.58□□□□□ -1.2
NME3-202ENST00000561637 RPS28P62857 69 aaKnown RBP7.49□□□□□ -1.21
NME3-202ENST00000561637 PCP4P48539 62 aa7.43□□□□□ -1.22
NME3-202ENST00000561637 OBSCNQ5VST9 7968 aa7.39□□□□□ -1.23
NME3-202ENST00000561637 KRTAP9-4Q9BYQ2 154 aa7.37□□□□□ -1.23
NME3-202ENST00000561637 KRTAP9-9Q9BYP9 154 aa7.35□□□□□ -1.23
NME3-202ENST00000561637 KRTAP6-2Q3LI66 62 aa7.32□□□□□ -1.24
NME3-202ENST00000561637 KRTAP5-1Q6L8H4 278 aa7.01□□□□□ -1.29
NME3-202ENST00000561637 MT3P25713 68 aa6.93□□□□□ -1.3
NME3-202ENST00000561637 BRK1Q8WUW1 75 aa6.55□□□□□ -1.36
NME3-202ENST00000561637 LCE1EQ5T753 118 aa6.39□□□□□ -1.39
NME3-202ENST00000561637 KRTAP4-2Q9BYR5 136 aa6.15□□□□□ -1.42
NME3-202ENST00000561637 LCE1BQ5T7P3 118 aa6.12□□□□□ -1.43
NME3-202ENST00000561637 PRAC1Q96KF2 57 aa6.11□□□□□ -1.43
NME3-202ENST00000561637 PMAIP1Q13794 54 aa6.09□□□□□ -1.43
NME3-202ENST00000561637 SVIPQ8NHG7 77 aa6.03□□□□□ -1.44
NME3-202ENST00000561637 PRO0628Q9UI54 55 aa5.99□□□□□ -1.45
NME3-202ENST00000561637 LCE1CQ5T751 118 aa5.92□□□□□ -1.46
NME3-202ENST00000561637 KRTAP4-12Q9BQ66 201 aa5.91□□□□□ -1.46
NME3-202ENST00000561637 LCE3DQ9BYE3 92 aa5.63□□□□□ -1.51
NME3-202ENST00000561637 KRTAP5-11Q6L8G4 156 aa5.55□□□□□ -1.52
NME3-202ENST00000561637 KTN1-AS1Q86SY8 53 aa5.54□□□□□ -1.52
NME3-202ENST00000561637 LCE1FQ5T754 118 aa5.43□□□□□ -1.54
NME3-202ENST00000561637 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.38□□□□□ -1.55
NME3-202ENST00000561637 PHGR1C9JFL3 82 aa5.36□□□□□ -1.55
NME3-202ENST00000561637 LCE3EQ5T5B0 92 aa5.27□□□□□ -1.57
NME3-202ENST00000561637 KRTAP21-2Q3LI59 83 aa5.03□□□□□ -1.6
NME3-202ENST00000561637 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
NME3-202ENST00000561637 KRTAP4-4Q9BYR3 166 aa4.71□□□□□ -1.66
NME3-202ENST00000561637 MUC19Q7Z5P9 8384 aa4.63□□□□□ -1.67
NME3-202ENST00000561637 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
NME3-202ENST00000561637 H3BS24 57 aa4.06□□□□□ -1.76
NME3-202ENST00000561637 KRTAP21-1Q3LI58 79 aa4.04□□□□□ -1.76
NME3-202ENST00000561637 PRM1P04553 51 aa3.96□□□□□ -1.78
NME3-202ENST00000561637 A0A0A0MQY5 61 aa3.85□□□□□ -1.79
NME3-202ENST00000561637 INE1O15225 51 aa3.62□□□□□ -1.83
NME3-202ENST00000561637 MUC16Q8WXI7 14507 aa3.24□□□□□ -1.89
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms