RNA–Protein interactions for RNA: ENST00000561521.1

LINC00662-201, long intergenic non-protein coding RNA 662, humanhuman

TSL 2 BASIC

Gene LINC00662, Length 2,480 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-201ENST00000561521 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
LINC00662-201ENST00000561521 SPRR2GQ9BYE4 73 aa3.74□□□□□ -1.81
LINC00662-201ENST00000561521 MT2AP02795 61 aa3.72□□□□□ -1.81
LINC00662-201ENST00000561521 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.81
LINC00662-201ENST00000561521 KRTAP5-3Q6L8H2 238 aa3.71□□□□□ -1.82
LINC00662-201ENST00000561521 MT1FP04733 61 aa3.68□□□□□ -1.82
LINC00662-201ENST00000561521 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
LINC00662-201ENST00000561521 KRTAP9-3Q9BYQ3 159 aa3.67□□□□□ -1.82
LINC00662-201ENST00000561521 USH2AO75445 5202 aa3.6□□□□□ -1.83
LINC00662-201ENST00000561521 KRTAP10-7P60409 375 aaPredicted RBP3.58□□□□□ -1.84
LINC00662-201ENST00000561521 KRTAP19-4Q3LI73 84 aa3.56□□□□□ -1.84
LINC00662-201ENST00000561521 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
LINC00662-201ENST00000561521 KRTAP19-6Q3LI70 58 aa3.55□□□□□ -1.84
LINC00662-201ENST00000561521 SSPOA2VEC9 5147 aa3.54□□□□□ -1.84
LINC00662-201ENST00000561521 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
LINC00662-201ENST00000561521 KRTAP19-8Q3LI54 63 aa3.49□□□□□ -1.85
LINC00662-201ENST00000561521 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
LINC00662-201ENST00000561521 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
LINC00662-201ENST00000561521 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
LINC00662-201ENST00000561521 MT1XP80297 61 aa3.44□□□□□ -1.86
LINC00662-201ENST00000561521 MT1BP07438 61 aa3.41□□□□□ -1.86
LINC00662-201ENST00000561521 SYNE2Q8WXH0 6885 aaKnown RBP3.39□□□□□ -1.87
LINC00662-201ENST00000561521 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
LINC00662-201ENST00000561521 NEBP20929 6669 aa3.36□□□□□ -1.87
LINC00662-201ENST00000561521 KRTAP12-4P60329 112 aa3.35□□□□□ -1.87
LINC00662-201ENST00000561521 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
LINC00662-201ENST00000561521 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
LINC00662-201ENST00000561521 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
LINC00662-201ENST00000561521 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
LINC00662-201ENST00000561521 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
LINC00662-201ENST00000561521 MT1EP04732 61 aa3.11□□□□□ -1.91
LINC00662-201ENST00000561521 MT1AP04731 61 aa3.08□□□□□ -1.92
LINC00662-201ENST00000561521 MUC12Q9UKN1 5478 aa3.06□□□□□ -1.92
LINC00662-201ENST00000561521 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
LINC00662-201ENST00000561521 MT1LQ93083 61 aa3.05□□□□□ -1.92
LINC00662-201ENST00000561521 PRM1P04553 51 aa3.04□□□□□ -1.92
LINC00662-201ENST00000561521 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
LINC00662-201ENST00000561521 SPRR2EP22531 72 aa3.02□□□□□ -1.93
LINC00662-201ENST00000561521 SPRR2BP35325 72 aa3.02□□□□□ -1.93
LINC00662-201ENST00000561521 SPRR2AP35326 72 aa3.02□□□□□ -1.93
LINC00662-201ENST00000561521 KMT2DO14686 5537 aa3.01□□□□□ -1.93
LINC00662-201ENST00000561521 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
LINC00662-201ENST00000561521 MDN1Q9NU22 5596 aa2.96□□□□□ -1.94
LINC00662-201ENST00000561521 SPRR2DP22532 72 aa2.93□□□□□ -1.94
LINC00662-201ENST00000561521 MT3P25713 68 aa2.92□□□□□ -1.94
LINC00662-201ENST00000561521 KRTAP19-3Q7Z4W3 81 aa2.81□□□□□ -1.96
LINC00662-201ENST00000561521 MT1GP13640 62 aa2.77□□□□□ -1.97
LINC00662-201ENST00000561521 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
LINC00662-201ENST00000561521 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
LINC00662-201ENST00000561521 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
LINC00662-201ENST00000561521 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
LINC00662-201ENST00000561521 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.98
LINC00662-201ENST00000561521 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
LINC00662-201ENST00000561521 MT1MQ8N339 61 aa2.7□□□□□ -1.98
LINC00662-201ENST00000561521 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
LINC00662-201ENST00000561521 DSTQ03001 7570 aaKnown RBP2.63□□□□□ -1.99
LINC00662-201ENST00000561521 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
LINC00662-201ENST00000561521 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
LINC00662-201ENST00000561521 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
LINC00662-201ENST00000561521 KRTAP6-1Q3LI64 71 aa2.52□□□□□ -2.01
LINC00662-201ENST00000561521 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
LINC00662-201ENST00000561521 MT4P47944 62 aa2.5□□□□□ -2.01
LINC00662-201ENST00000561521 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
LINC00662-201ENST00000561521 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
LINC00662-201ENST00000561521 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
LINC00662-201ENST00000561521 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
LINC00662-201ENST00000561521 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
LINC00662-201ENST00000561521 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
LINC00662-201ENST00000561521 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
LINC00662-201ENST00000561521 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
LINC00662-201ENST00000561521 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
LINC00662-201ENST00000561521 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
LINC00662-201ENST00000561521 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
LINC00662-201ENST00000561521 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
LINC00662-201ENST00000561521 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
LINC00662-201ENST00000561521 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
LINC00662-201ENST00000561521 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 58.2 ms