RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 AHNAK2Q8IVF2 5795 aa9.48□□□□□ -0.89
SNRPA1-215ENST00000561187 KRTAP4-2Q9BYR5 136 aa9.47□□□□□ -0.89
SNRPA1-215ENST00000561187 COX7CP15954 63 aa9.44□□□□□ -0.9
SNRPA1-215ENST00000561187 SMIM26A0A096LP01 95 aa9.42□□□□□ -0.9
SNRPA1-215ENST00000561187 A0A1B0GU69 56 aa9.41□□□□□ -0.9
SNRPA1-215ENST00000561187 H7BZZ5 65 aa9.41□□□□□ -0.9
SNRPA1-215ENST00000561187 TNP1P09430 55 aa9.34□□□□□ -0.91
SNRPA1-215ENST00000561187 KRTAP5-4Q6L8H1 288 aa9.33□□□□□ -0.92
SNRPA1-215ENST00000561187 KRTAP4-11Q9BYQ6 195 aa9.25□□□□□ -0.93
SNRPA1-215ENST00000561187 KRTAP5-10Q6L8G5 202 aa9.2□□□□□ -0.94
SNRPA1-215ENST00000561187 KRTAP19-4Q3LI73 84 aa9.14□□□□□ -0.95
SNRPA1-215ENST00000561187 KRTAP12-3P60328 96 aa9.07□□□□□ -0.96
SNRPA1-215ENST00000561187 PRR15LQ9BU68 103 aa8.97□□□□□ -0.97
SNRPA1-215ENST00000561187 ANAPC13Q9BS18 74 aa8.95□□□□□ -0.98
SNRPA1-215ENST00000561187 KRTAP5-3Q6L8H2 238 aa8.92□□□□□ -0.98
SNRPA1-215ENST00000561187 KRTAP20-2Q3LI61 65 aa8.89□□□□□ -0.99
SNRPA1-215ENST00000561187 KRTAP5-7Q6L8G8 165 aa8.85□□□□□ -0.99
SNRPA1-215ENST00000561187 CCDC179H3BU77 68 aa8.84□□□□□ -0.99
SNRPA1-215ENST00000561187 KRTAP5-5Q701N2 237 aaPredicted RBP8.83□□□□□ -1
SNRPA1-215ENST00000561187 LINC01558Q9Y6Z2 57 aa8.79□□□□□ -1
SNRPA1-215ENST00000561187 SYNE1Q8NF91 8797 aaKnown RBP8.74□□□□□ -1.01
SNRPA1-215ENST00000561187 SPRR5A0A1B0GTR4 108 aa8.72□□□□□ -1.01
SNRPA1-215ENST00000561187 ATP5EP56381 51 aaPredicted RBP8.71□□□□□ -1.02
SNRPA1-215ENST00000561187 KRTAP12-4P60329 112 aa8.69□□□□□ -1.02
SNRPA1-215ENST00000561187 UQCR11O14957 56 aa8.66□□□□□ -1.02
SNRPA1-215ENST00000561187 KRTAP25-1Q3LHN0 102 aa8.59□□□□□ -1.03
SNRPA1-215ENST00000561187 H3BS24 57 aa8.47□□□□□ -1.05
SNRPA1-215ENST00000561187 MIR22HGQ0VDD5 57 aa8.47□□□□□ -1.05
SNRPA1-215ENST00000561187 TMEM258P61165 79 aa8.37□□□□□ -1.07
SNRPA1-215ENST00000561187 K7ERS5 55 aa8.35□□□□□ -1.07
SNRPA1-215ENST00000561187 KRTAP15-1Q3LI76 137 aa8.33□□□□□ -1.08
SNRPA1-215ENST00000561187 LCE3CQ5T5A8 94 aa8.29□□□□□ -1.08
SNRPA1-215ENST00000561187 PSPHP1O15172 72 aa8.18□□□□□ -1.1
SNRPA1-215ENST00000561187 KRTAP6-1Q3LI64 71 aa8.18□□□□□ -1.1
SNRPA1-215ENST00000561187 MT1AP04731 61 aa8.14□□□□□ -1.11
SNRPA1-215ENST00000561187 KRTAP23-1A1A580 65 aa8.13□□□□□ -1.11
SNRPA1-215ENST00000561187 KRTAP5-2Q701N4 177 aa8.12□□□□□ -1.11
SNRPA1-215ENST00000561187 V9GYY9 64 aa7.95□□□□□ -1.14
SNRPA1-215ENST00000561187 KRTAP5-8O75690 187 aa7.92□□□□□ -1.14
SNRPA1-215ENST00000561187 KRTAP9-6A8MVA2 160 aa7.9□□□□□ -1.14
SNRPA1-215ENST00000561187 Q1T7F1 81 aa7.89□□□□□ -1.15
SNRPA1-215ENST00000561187 KRTAP6-2Q3LI66 62 aa7.88□□□□□ -1.15
SNRPA1-215ENST00000561187 CDC42SE1Q9NRR8 79 aa7.88□□□□□ -1.15
SNRPA1-215ENST00000561187 AHNAKQ09666 5890 aaKnown RBP7.85□□□□□ -1.15
SNRPA1-215ENST00000561187 A6NED7 52 aa7.84□□□□□ -1.15
SNRPA1-215ENST00000561187 OBSCNQ5VST9 7968 aa7.83□□□□□ -1.16
SNRPA1-215ENST00000561187 MUC5BQ9HC84 5762 aaPredicted RBP7.83□□□□□ -1.16
SNRPA1-215ENST00000561187 MUC5ACP98088 5654 aa7.79□□□□□ -1.16
SNRPA1-215ENST00000561187 RPS28P62857 69 aaKnown RBP7.78□□□□□ -1.16
SNRPA1-215ENST00000561187 ROMO1P60602 79 aa7.73□□□□□ -1.17
SNRPA1-215ENST00000561187 MT3P25713 68 aa7.44□□□□□ -1.22
SNRPA1-215ENST00000561187 KRTAP5-1Q6L8H4 278 aa7.36□□□□□ -1.23
SNRPA1-215ENST00000561187 LCE1EQ5T753 118 aa6.84□□□□□ -1.31
SNRPA1-215ENST00000561187 LCE1BQ5T7P3 118 aa6.66□□□□□ -1.34
SNRPA1-215ENST00000561187 PCP4P48539 62 aa6.63□□□□□ -1.35
SNRPA1-215ENST00000561187 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.4□□□□□ -1.38
SNRPA1-215ENST00000561187 LCE1CQ5T751 118 aa6.38□□□□□ -1.39
SNRPA1-215ENST00000561187 BRK1Q8WUW1 75 aa6.28□□□□□ -1.4
SNRPA1-215ENST00000561187 KRTAP5-11Q6L8G4 156 aa6.16□□□□□ -1.42
SNRPA1-215ENST00000561187 LCE3DQ9BYE3 92 aa5.9□□□□□ -1.46
SNRPA1-215ENST00000561187 PRAC1Q96KF2 57 aa5.86□□□□□ -1.47
SNRPA1-215ENST00000561187 PMAIP1Q13794 54 aa5.81□□□□□ -1.48
SNRPA1-215ENST00000561187 LCE1FQ5T754 118 aa5.68□□□□□ -1.5
SNRPA1-215ENST00000561187 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
SNRPA1-215ENST00000561187 LCE3EQ5T5B0 92 aa5.48□□□□□ -1.53
SNRPA1-215ENST00000561187 PHGR1C9JFL3 82 aa5.43□□□□□ -1.54
SNRPA1-215ENST00000561187 KRTAP21-2Q3LI59 83 aa5.34□□□□□ -1.55
SNRPA1-215ENST00000561187 KRTAP4-4Q9BYR3 166 aa5.31□□□□□ -1.56
SNRPA1-215ENST00000561187 LUZP6Q538Z0 58 aa4.89□□□□□ -1.63
SNRPA1-215ENST00000561187 PRO0628Q9UI54 55 aa4.88□□□□□ -1.63
SNRPA1-215ENST00000561187 MUC19Q7Z5P9 8384 aa4.87□□□□□ -1.63
SNRPA1-215ENST00000561187 KTN1-AS1Q86SY8 53 aa4.85□□□□□ -1.63
SNRPA1-215ENST00000561187 A0A0A0MQY5 61 aa4.62□□□□□ -1.67
SNRPA1-215ENST00000561187 KRTAP21-1Q3LI58 79 aa4.06□□□□□ -1.76
SNRPA1-215ENST00000561187 PRM1P04553 51 aa3.99□□□□□ -1.77
SNRPA1-215ENST00000561187 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
SNRPA1-215ENST00000561187 MUC16Q8WXI7 14507 aa3.42□□□□□ -1.86
SNRPA1-215ENST00000561187 INE1O15225 51 aa2.78□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 105 ms