RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 LINC01558Q9Y6Z2 57 aa3.01□□□□□ -1.93
GABPB1-211ENST00000561010 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
GABPB1-211ENST00000561010 H0YAA0 97 aa3□□□□□ -1.93
GABPB1-211ENST00000561010 CHKB-CPT1BH3BT56 60 aa3□□□□□ -1.93
GABPB1-211ENST00000561010 PSPHP1O15172 72 aa3□□□□□ -1.93
GABPB1-211ENST00000561010 KRTAP8-1Q8IUC2 63 aa3□□□□□ -1.93
GABPB1-211ENST00000561010 DMAC1Q96GE9 116 aa2.99□□□□□ -1.93
GABPB1-211ENST00000561010 P0C880 135 aa2.98□□□□□ -1.93
GABPB1-211ENST00000561010 PRR15LQ9BU68 103 aa2.98□□□□□ -1.93
GABPB1-211ENST00000561010 PLAC4Q8WY50 150 aa2.97□□□□□ -1.93
GABPB1-211ENST00000561010 PRO2289Q9P1D8 64 aa2.97□□□□□ -1.93
GABPB1-211ENST00000561010 A6NED7 52 aa2.95□□□□□ -1.94
GABPB1-211ENST00000561010 SPRR2DP22532 72 aa2.95□□□□□ -1.94
GABPB1-211ENST00000561010 SPTSSBQ8NFR3 76 aa2.95□□□□□ -1.94
GABPB1-211ENST00000561010 M0QZ58 72 aa2.94□□□□□ -1.94
GABPB1-211ENST00000561010 LINC01554Q52M75 96 aa2.94□□□□□ -1.94
GABPB1-211ENST00000561010 R4GN34 69 aa2.94□□□□□ -1.94
GABPB1-211ENST00000561010 KRTAP12-2P59991 146 aa2.93□□□□□ -1.94
GABPB1-211ENST00000561010 KRTAP2-1Q9BYU5 128 aa2.93□□□□□ -1.94
GABPB1-211ENST00000561010 A0A1B0GU69 56 aa2.92□□□□□ -1.94
GABPB1-211ENST00000561010 CDC42SE1Q9NRR8 79 aa2.92□□□□□ -1.94
GABPB1-211ENST00000561010 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
GABPB1-211ENST00000561010 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
GABPB1-211ENST00000561010 UQCR11O14957 56 aa2.87□□□□□ -1.95
GABPB1-211ENST00000561010 SPATA8Q6RVD6 105 aa2.85□□□□□ -1.95
GABPB1-211ENST00000561010 MIR22HGQ0VDD5 57 aa2.84□□□□□ -1.95
GABPB1-211ENST00000561010 KTN1-AS1Q86SY8 53 aa2.81□□□□□ -1.96
GABPB1-211ENST00000561010 A0A1B0GU33 70 aa2.78□□□□□ -1.96
GABPB1-211ENST00000561010 K7ERS5 55 aa2.75□□□□□ -1.97
GABPB1-211ENST00000561010 KRTAP13-4Q3LI77 160 aa2.75□□□□□ -1.97
GABPB1-211ENST00000561010 LCE3AQ5TA76 89 aa2.73□□□□□ -1.97
GABPB1-211ENST00000561010 KRTAP19-7Q3SYF9 63 aa2.72□□□□□ -1.97
GABPB1-211ENST00000561010 DSTQ03001 7570 aaKnown RBP2.71□□□□□ -1.97
GABPB1-211ENST00000561010 MT1EP04732 61 aa2.7□□□□□ -1.98
GABPB1-211ENST00000561010 CAMK2N1Q7Z7J9 78 aa2.69□□□□□ -1.98
GABPB1-211ENST00000561010 KRTAP19-3Q7Z4W3 81 aa2.68□□□□□ -1.98
GABPB1-211ENST00000561010 A0A0D9SG42 100 aa2.65□□□□□ -1.99
GABPB1-211ENST00000561010 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
GABPB1-211ENST00000561010 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.99
GABPB1-211ENST00000561010 KRTAP19-5Q3LI72 72 aa2.64□□□□□ -1.99
GABPB1-211ENST00000561010 MT4P47944 62 aa2.62□□□□□ -1.99
GABPB1-211ENST00000561010 ROMO1P60602 79 aa2.6□□□□□ -1.99
GABPB1-211ENST00000561010 SPINT4Q6UDR6 99 aa2.59□□□□□ -1.99
GABPB1-211ENST00000561010 MT1GP13640 62 aa2.58□□□□□ -2
GABPB1-211ENST00000561010 MT1MQ8N339 61 aa2.58□□□□□ -2
GABPB1-211ENST00000561010 KRTAP12-1P59990 96 aa2.57□□□□□ -2
GABPB1-211ENST00000561010 KRTAP25-1Q3LHN0 102 aa2.57□□□□□ -2
GABPB1-211ENST00000561010 MT1LQ93083 61 aa2.56□□□□□ -2
GABPB1-211ENST00000561010 PP632Q6XCG6 107 aa2.54□□□□□ -2
GABPB1-211ENST00000561010 C10orf95Q9H7T3 257 aa2.52□□□□□ -2.01
GABPB1-211ENST00000561010 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
GABPB1-211ENST00000561010 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
GABPB1-211ENST00000561010 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
GABPB1-211ENST00000561010 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
GABPB1-211ENST00000561010 TNP1P09430 55 aa2.43□□□□□ -2.02
GABPB1-211ENST00000561010 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
GABPB1-211ENST00000561010 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
GABPB1-211ENST00000561010 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
GABPB1-211ENST00000561010 KRTAP12-3P60328 96 aa2.39□□□□□ -2.03
GABPB1-211ENST00000561010 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
GABPB1-211ENST00000561010 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
GABPB1-211ENST00000561010 LUZP6Q538Z0 58 aa2.34□□□□□ -2.03
GABPB1-211ENST00000561010 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
GABPB1-211ENST00000561010 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
GABPB1-211ENST00000561010 SYNE1Q8NF91 8797 aaKnown RBP2.27□□□□□ -2.05
GABPB1-211ENST00000561010 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
GABPB1-211ENST00000561010 MT1AP04731 61 aa2.16□□□□□ -2.06
GABPB1-211ENST00000561010 KRTAP6-2Q3LI66 62 aa2.11□□□□□ -2.07
GABPB1-211ENST00000561010 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
GABPB1-211ENST00000561010 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
GABPB1-211ENST00000561010 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
GABPB1-211ENST00000561010 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
GABPB1-211ENST00000561010 INE1O15225 51 aa1.9□□□□□ -2.11
GABPB1-211ENST00000561010 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
GABPB1-211ENST00000561010 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
GABPB1-211ENST00000561010 PRM1P04553 51 aa1.34□□□□□ -2.19
GABPB1-211ENST00000561010 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
GABPB1-211ENST00000561010 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 185.1 ms